Gene : Potri.001G067400 P. trichocarpa v3.1

Defline:  (1 of 2) K09602 - ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] (OTUB1) Genomic Order:  700
Name:  ? Potri.001G067400 Secondary Identifier:  ? PAC:37277757

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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G067400 0.5kb upstream 0.5kb upstream 3716 true Chr01: 5358432-5362147 Populus trichocarpa
Potri.001G067400 0.5kb upstream 0.5kb upstream 500 false Chr01: 5361648-5362147 Populus trichocarpa
Potri.001G067400 0.5kb downstream 0.5kb downstream 3716 true Chr01: 5357932-5361647 Populus trichocarpa
Potri.001G067400 0.5kb downstream 0.5kb downstream 500 false Chr01: 5357932-5358431 Populus trichocarpa
Potri.001G067400 1.0kb upstream 1.0kb upstream 4216 true Chr01: 5358432-5362647 Populus trichocarpa
Potri.001G067400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5361648-5362647 Populus trichocarpa
Potri.001G067400 1.0kb downstream 1.0kb downstream 4216 true Chr01: 5357432-5361647 Populus trichocarpa
Potri.001G067400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5357432-5358431 Populus trichocarpa
Potri.001G067400 2.0kb upstream 2.0kb upstream 5216 true Chr01: 5358432-5363647 Populus trichocarpa
Potri.001G067400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5361648-5363647 Populus trichocarpa
Potri.001G067400 2.0kb downstream 2.0kb downstream 5216 true Chr01: 5356432-5361647 Populus trichocarpa
Potri.001G067400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5356432-5358431 Populus trichocarpa
Potri.001G067400 5.0kb upstream 5.0kb upstream 8216 true Chr01: 5358432-5366647 Populus trichocarpa
Potri.001G067400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5361648-5366647 Populus trichocarpa
Potri.001G067400 5.0kb downstream 5.0kb downstream 8216 true Chr01: 5353432-5361647 Populus trichocarpa
Potri.001G067400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5353432-5358431 Populus trichocarpa
Potri.001G067400 10.0kb upstream 10.0kb upstream 13216 true Chr01: 5358432-5371647 Populus trichocarpa
Potri.001G067400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5361648-5371647 Populus trichocarpa
Potri.001G067400 10.0kb downstream 10.0kb downstream 13216 true Chr01: 5348432-5361647 Populus trichocarpa
Potri.001G067400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5348432-5358431 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413408 5262 Malpighiales View MSA
124243914 5268 Malvidae View MSA
124065600 5270 Rosid View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain