Gene : Potri.001G136600 P. trichocarpa v3.1

Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  1412
Name:  ? Potri.001G136600 Secondary Identifier:  ? PAC:37278118

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-1319 Populus trichocarpa pathologic  
Ptrichocarpa PWY4FS-7 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7411 Populus trichocarpa pathologic  
Ptrichocarpa TRIGLSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G136600 0.5kb upstream 0.5kb upstream 8361 true Chr01: 10969442-10977802 Populus trichocarpa
Potri.001G136600 0.5kb upstream 0.5kb upstream 500 false Chr01: 10977303-10977802 Populus trichocarpa
Potri.001G136600 0.5kb downstream 0.5kb downstream 8361 true Chr01: 10968942-10977302 Populus trichocarpa
Potri.001G136600 0.5kb downstream 0.5kb downstream 500 false Chr01: 10968942-10969441 Populus trichocarpa
Potri.001G136600 1.0kb upstream 1.0kb upstream 8861 true Chr01: 10969442-10978302 Populus trichocarpa
Potri.001G136600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10977303-10978302 Populus trichocarpa
Potri.001G136600 1.0kb downstream 1.0kb downstream 8861 true Chr01: 10968442-10977302 Populus trichocarpa
Potri.001G136600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10968442-10969441 Populus trichocarpa
Potri.001G136600 2.0kb upstream 2.0kb upstream 9861 true Chr01: 10969442-10979302 Populus trichocarpa
Potri.001G136600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10977303-10979302 Populus trichocarpa
Potri.001G136600 2.0kb downstream 2.0kb downstream 9861 true Chr01: 10967442-10977302 Populus trichocarpa
Potri.001G136600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10967442-10969441 Populus trichocarpa
Potri.001G136600 5.0kb upstream 5.0kb upstream 12861 true Chr01: 10969442-10982302 Populus trichocarpa
Potri.001G136600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10977303-10982302 Populus trichocarpa
Potri.001G136600 5.0kb downstream 5.0kb downstream 12861 true Chr01: 10964442-10977302 Populus trichocarpa
Potri.001G136600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10964442-10969441 Populus trichocarpa
Potri.001G136600 10.0kb upstream 10.0kb upstream 17861 true Chr01: 10969442-10987302 Populus trichocarpa
Potri.001G136600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10977303-10987302 Populus trichocarpa
Potri.001G136600 10.0kb downstream 10.0kb downstream 17861 true Chr01: 10959442-10977302 Populus trichocarpa
Potri.001G136600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10959442-10969441 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459896 5262 Malpighiales View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain