Gene : Potri.001G122800 P. trichocarpa v3.1

Defline:  (1 of 103) PF03514 - GRAS domain family (GRAS) Genomic Order:  1273
Name:  ? Potri.001G122800 Secondary Identifier:  ? PAC:37276407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G122800 0.5kb upstream 0.5kb upstream 4674 true Chr01: 9948381-9953054 Populus trichocarpa
Potri.001G122800 0.5kb upstream 0.5kb upstream 500 false Chr01: 9948381-9948880 Populus trichocarpa
Potri.001G122800 0.5kb downstream 0.5kb downstream 4674 true Chr01: 9948881-9953554 Populus trichocarpa
Potri.001G122800 0.5kb downstream 0.5kb downstream 500 false Chr01: 9953055-9953554 Populus trichocarpa
Potri.001G122800 1.0kb upstream 1.0kb upstream 5174 true Chr01: 9947881-9953054 Populus trichocarpa
Potri.001G122800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9947881-9948880 Populus trichocarpa
Potri.001G122800 1.0kb downstream 1.0kb downstream 5174 true Chr01: 9948881-9954054 Populus trichocarpa
Potri.001G122800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9953055-9954054 Populus trichocarpa
Potri.001G122800 2.0kb upstream 2.0kb upstream 6174 true Chr01: 9946881-9953054 Populus trichocarpa
Potri.001G122800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9946881-9948880 Populus trichocarpa
Potri.001G122800 2.0kb downstream 2.0kb downstream 6174 true Chr01: 9948881-9955054 Populus trichocarpa
Potri.001G122800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9953055-9955054 Populus trichocarpa
Potri.001G122800 5.0kb upstream 5.0kb upstream 9174 true Chr01: 9943881-9953054 Populus trichocarpa
Potri.001G122800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9943881-9948880 Populus trichocarpa
Potri.001G122800 5.0kb downstream 5.0kb downstream 9174 true Chr01: 9948881-9958054 Populus trichocarpa
Potri.001G122800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9953055-9958054 Populus trichocarpa
Potri.001G122800 10.0kb upstream 10.0kb upstream 14174 true Chr01: 9938881-9953054 Populus trichocarpa
Potri.001G122800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9938881-9948880 Populus trichocarpa
Potri.001G122800 10.0kb downstream 10.0kb downstream 14174 true Chr01: 9948881-9963054 Populus trichocarpa
Potri.001G122800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9953055-9963054 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461671 5262 Malpighiales View MSA
124250947 5268 Malvidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain