Gene : Potri.001G094900 P. trichocarpa v3.1

Defline:  (1 of 15) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) Genomic Order:  988
Name:  ? Potri.001G094900 Secondary Identifier:  ? PAC:37278943

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G094900 0.5kb upstream 0.5kb upstream 4729 true Chr01: 7480957-7485685 Populus trichocarpa
Potri.001G094900 0.5kb upstream 0.5kb upstream 500 false Chr01: 7485186-7485685 Populus trichocarpa
Potri.001G094900 0.5kb downstream 0.5kb downstream 4729 true Chr01: 7480457-7485185 Populus trichocarpa
Potri.001G094900 0.5kb downstream 0.5kb downstream 500 false Chr01: 7480457-7480956 Populus trichocarpa
Potri.001G094900 1.0kb upstream 1.0kb upstream 5229 true Chr01: 7480957-7486185 Populus trichocarpa
Potri.001G094900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7485186-7486185 Populus trichocarpa
Potri.001G094900 1.0kb downstream 1.0kb downstream 5229 true Chr01: 7479957-7485185 Populus trichocarpa
Potri.001G094900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7479957-7480956 Populus trichocarpa
Potri.001G094900 2.0kb upstream 2.0kb upstream 6229 true Chr01: 7480957-7487185 Populus trichocarpa
Potri.001G094900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7485186-7487185 Populus trichocarpa
Potri.001G094900 2.0kb downstream 2.0kb downstream 6229 true Chr01: 7478957-7485185 Populus trichocarpa
Potri.001G094900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7478957-7480956 Populus trichocarpa
Potri.001G094900 5.0kb upstream 5.0kb upstream 9229 true Chr01: 7480957-7490185 Populus trichocarpa
Potri.001G094900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7485186-7490185 Populus trichocarpa
Potri.001G094900 5.0kb downstream 5.0kb downstream 9229 true Chr01: 7475957-7485185 Populus trichocarpa
Potri.001G094900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7475957-7480956 Populus trichocarpa
Potri.001G094900 10.0kb upstream 10.0kb upstream 14229 true Chr01: 7480957-7495185 Populus trichocarpa
Potri.001G094900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7485186-7495185 Populus trichocarpa
Potri.001G094900 10.0kb downstream 10.0kb downstream 14229 true Chr01: 7470957-7485185 Populus trichocarpa
Potri.001G094900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7470957-7480956 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427487 5262 Malpighiales View MSA
124253903 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain