Gene : Potri.001G187900 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1945
Name:  ? Potri.001G187900 Secondary Identifier:  ? PAC:37279146
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1001 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G187900 0.5kb upstream 0.5kb upstream 719 true Chr01: 16596877-16597595 Populus trichocarpa
Potri.001G187900 0.5kb upstream 0.5kb upstream 500 false Chr01: 16597096-16597595 Populus trichocarpa
Potri.001G187900 0.5kb downstream 0.5kb downstream 719 true Chr01: 16596377-16597095 Populus trichocarpa
Potri.001G187900 0.5kb downstream 0.5kb downstream 500 false Chr01: 16596377-16596876 Populus trichocarpa
Potri.001G187900 1.0kb upstream 1.0kb upstream 1219 true Chr01: 16596877-16598095 Populus trichocarpa
Potri.001G187900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16597096-16598095 Populus trichocarpa
Potri.001G187900 1.0kb downstream 1.0kb downstream 1219 true Chr01: 16595877-16597095 Populus trichocarpa
Potri.001G187900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16595877-16596876 Populus trichocarpa
Potri.001G187900 2.0kb upstream 2.0kb upstream 2219 true Chr01: 16596877-16599095 Populus trichocarpa
Potri.001G187900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16597096-16599095 Populus trichocarpa
Potri.001G187900 2.0kb downstream 2.0kb downstream 2219 true Chr01: 16594877-16597095 Populus trichocarpa
Potri.001G187900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16594877-16596876 Populus trichocarpa
Potri.001G187900 5.0kb upstream 5.0kb upstream 5219 true Chr01: 16596877-16602095 Populus trichocarpa
Potri.001G187900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16597096-16602095 Populus trichocarpa
Potri.001G187900 5.0kb downstream 5.0kb downstream 5219 true Chr01: 16591877-16597095 Populus trichocarpa
Potri.001G187900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16591877-16596876 Populus trichocarpa
Potri.001G187900 10.0kb upstream 10.0kb upstream 10219 true Chr01: 16596877-16607095 Populus trichocarpa
Potri.001G187900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16597096-16607095 Populus trichocarpa
Potri.001G187900 10.0kb downstream 10.0kb downstream 10219 true Chr01: 16586877-16597095 Populus trichocarpa
Potri.001G187900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16586877-16596876 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028410 5273 Angiosperm View MSA
122391380 5262 Malpighiales Singleton cluster - no MSA
124189049 5268 Malvidae Singleton cluster - no MSA
123910017 5270 Rosid Singleton cluster - no MSA
123491129 5271 Pentapetalae Singleton cluster - no MSA
122526315 5272 Eudicot Singleton cluster - no MSA
121297904 5274 Embryophyte View MSA
123335917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain