Gene : Potri.001G171900 P. trichocarpa v3.1
Defline:  (1 of 80) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1777
Name:  ? Potri.001G171900 Secondary Identifier:  ? PAC:37277370
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G171900 0.5kb upstream 0.5kb upstream 5930 true Chr01: 14567762-14573691 Populus trichocarpa
Potri.001G171900 0.5kb upstream 0.5kb upstream 500 false Chr01: 14573192-14573691 Populus trichocarpa
Potri.001G171900 0.5kb downstream 0.5kb downstream 5930 true Chr01: 14567262-14573191 Populus trichocarpa
Potri.001G171900 0.5kb downstream 0.5kb downstream 500 false Chr01: 14567262-14567761 Populus trichocarpa
Potri.001G171900 1.0kb upstream 1.0kb upstream 6430 true Chr01: 14567762-14574191 Populus trichocarpa
Potri.001G171900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14573192-14574191 Populus trichocarpa
Potri.001G171900 1.0kb downstream 1.0kb downstream 6430 true Chr01: 14566762-14573191 Populus trichocarpa
Potri.001G171900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14566762-14567761 Populus trichocarpa
Potri.001G171900 2.0kb upstream 2.0kb upstream 7430 true Chr01: 14567762-14575191 Populus trichocarpa
Potri.001G171900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14573192-14575191 Populus trichocarpa
Potri.001G171900 2.0kb downstream 2.0kb downstream 7430 true Chr01: 14565762-14573191 Populus trichocarpa
Potri.001G171900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14565762-14567761 Populus trichocarpa
Potri.001G171900 5.0kb upstream 5.0kb upstream 10430 true Chr01: 14567762-14578191 Populus trichocarpa
Potri.001G171900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14573192-14578191 Populus trichocarpa
Potri.001G171900 5.0kb downstream 5.0kb downstream 10430 true Chr01: 14562762-14573191 Populus trichocarpa
Potri.001G171900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14562762-14567761 Populus trichocarpa
Potri.001G171900 10.0kb upstream 10.0kb upstream 15430 true Chr01: 14567762-14583191 Populus trichocarpa
Potri.001G171900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14573192-14583191 Populus trichocarpa
Potri.001G171900 10.0kb downstream 10.0kb downstream 15430 true Chr01: 14557762-14573191 Populus trichocarpa
Potri.001G171900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14557762-14567761 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456407 5262 Malpighiales View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain