Gene : Potri.001G156100 P. trichocarpa v3.1

Defline:  (1 of 5) K02877 - large subunit ribosomal protein L15e (RP-L15e, RPL15) Genomic Order:  1617
Name:  ? Potri.001G156100 Secondary Identifier:  ? PAC:37277226

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G156100 0.5kb upstream 0.5kb upstream 2900 true Chr01: 12947989-12950888 Populus trichocarpa
Potri.001G156100 0.5kb upstream 0.5kb upstream 500 false Chr01: 12947989-12948488 Populus trichocarpa
Potri.001G156100 0.5kb downstream 0.5kb downstream 2900 true Chr01: 12948489-12951388 Populus trichocarpa
Potri.001G156100 0.5kb downstream 0.5kb downstream 500 false Chr01: 12950889-12951388 Populus trichocarpa
Potri.001G156100 1.0kb upstream 1.0kb upstream 3400 true Chr01: 12947489-12950888 Populus trichocarpa
Potri.001G156100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12947489-12948488 Populus trichocarpa
Potri.001G156100 1.0kb downstream 1.0kb downstream 3400 true Chr01: 12948489-12951888 Populus trichocarpa
Potri.001G156100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12950889-12951888 Populus trichocarpa
Potri.001G156100 2.0kb upstream 2.0kb upstream 4400 true Chr01: 12946489-12950888 Populus trichocarpa
Potri.001G156100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12946489-12948488 Populus trichocarpa
Potri.001G156100 2.0kb downstream 2.0kb downstream 4400 true Chr01: 12948489-12952888 Populus trichocarpa
Potri.001G156100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12950889-12952888 Populus trichocarpa
Potri.001G156100 5.0kb upstream 5.0kb upstream 7400 true Chr01: 12943489-12950888 Populus trichocarpa
Potri.001G156100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12943489-12948488 Populus trichocarpa
Potri.001G156100 5.0kb downstream 5.0kb downstream 7400 true Chr01: 12948489-12955888 Populus trichocarpa
Potri.001G156100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12950889-12955888 Populus trichocarpa
Potri.001G156100 10.0kb upstream 10.0kb upstream 12400 true Chr01: 12938489-12950888 Populus trichocarpa
Potri.001G156100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12938489-12948488 Populus trichocarpa
Potri.001G156100 10.0kb downstream 10.0kb downstream 12400 true Chr01: 12948489-12960888 Populus trichocarpa
Potri.001G156100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12950889-12960888 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426900 5262 Malpighiales View MSA
124253125 5268 Malvidae View MSA
124071184 5270 Rosid View MSA
123741713 5271 Pentapetalae View MSA
122785898 5272 Eudicot View MSA
122047916 5273 Angiosperm View MSA
121345172 5274 Embryophyte View MSA
123424747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain