Gene : Potri.001G216300 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2228
Name:  ? Potri.001G216300 Secondary Identifier:  ? PAC:37275940
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G216300 0.5kb upstream 0.5kb upstream 1727 true Chr01: 21969805-21971531 Populus trichocarpa
Potri.001G216300 0.5kb upstream 0.5kb upstream 500 false Chr01: 21971032-21971531 Populus trichocarpa
Potri.001G216300 0.5kb downstream 0.5kb downstream 1727 true Chr01: 21969305-21971031 Populus trichocarpa
Potri.001G216300 0.5kb downstream 0.5kb downstream 500 false Chr01: 21969305-21969804 Populus trichocarpa
Potri.001G216300 1.0kb upstream 1.0kb upstream 2227 true Chr01: 21969805-21972031 Populus trichocarpa
Potri.001G216300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21971032-21972031 Populus trichocarpa
Potri.001G216300 1.0kb downstream 1.0kb downstream 2227 true Chr01: 21968805-21971031 Populus trichocarpa
Potri.001G216300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21968805-21969804 Populus trichocarpa
Potri.001G216300 2.0kb upstream 2.0kb upstream 3227 true Chr01: 21969805-21973031 Populus trichocarpa
Potri.001G216300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21971032-21973031 Populus trichocarpa
Potri.001G216300 2.0kb downstream 2.0kb downstream 3227 true Chr01: 21967805-21971031 Populus trichocarpa
Potri.001G216300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21967805-21969804 Populus trichocarpa
Potri.001G216300 5.0kb upstream 5.0kb upstream 6227 true Chr01: 21969805-21976031 Populus trichocarpa
Potri.001G216300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21971032-21976031 Populus trichocarpa
Potri.001G216300 5.0kb downstream 5.0kb downstream 6227 true Chr01: 21964805-21971031 Populus trichocarpa
Potri.001G216300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21964805-21969804 Populus trichocarpa
Potri.001G216300 10.0kb upstream 10.0kb upstream 11227 true Chr01: 21969805-21981031 Populus trichocarpa
Potri.001G216300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21971032-21981031 Populus trichocarpa
Potri.001G216300 10.0kb downstream 10.0kb downstream 11227 true Chr01: 21959805-21971031 Populus trichocarpa
Potri.001G216300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21959805-21969804 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464643 5262 Malpighiales View MSA
124251997 5268 Malvidae View MSA
124070283 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain