Gene : Potri.001G317500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11946//PTHR11946:SF78//PTHR11946:SF86 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED // METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  3289
Name:  ? Potri.001G317500 Secondary Identifier:  ? PAC:37276477
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G317500 0.5kb upstream 0.5kb upstream 6778 true Chr01: 32253970-32260747 Populus trichocarpa
Potri.001G317500 0.5kb upstream 0.5kb upstream 500 false Chr01: 32260248-32260747 Populus trichocarpa
Potri.001G317500 0.5kb downstream 0.5kb downstream 6778 true Chr01: 32253470-32260247 Populus trichocarpa
Potri.001G317500 0.5kb downstream 0.5kb downstream 500 false Chr01: 32253470-32253969 Populus trichocarpa
Potri.001G317500 1.0kb upstream 1.0kb upstream 7278 true Chr01: 32253970-32261247 Populus trichocarpa
Potri.001G317500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32260248-32261247 Populus trichocarpa
Potri.001G317500 1.0kb downstream 1.0kb downstream 7278 true Chr01: 32252970-32260247 Populus trichocarpa
Potri.001G317500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32252970-32253969 Populus trichocarpa
Potri.001G317500 2.0kb upstream 2.0kb upstream 8278 true Chr01: 32253970-32262247 Populus trichocarpa
Potri.001G317500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32260248-32262247 Populus trichocarpa
Potri.001G317500 2.0kb downstream 2.0kb downstream 8278 true Chr01: 32251970-32260247 Populus trichocarpa
Potri.001G317500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32251970-32253969 Populus trichocarpa
Potri.001G317500 5.0kb upstream 5.0kb upstream 11278 true Chr01: 32253970-32265247 Populus trichocarpa
Potri.001G317500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32260248-32265247 Populus trichocarpa
Potri.001G317500 5.0kb downstream 5.0kb downstream 11278 true Chr01: 32248970-32260247 Populus trichocarpa
Potri.001G317500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32248970-32253969 Populus trichocarpa
Potri.001G317500 10.0kb upstream 10.0kb upstream 16278 true Chr01: 32253970-32270247 Populus trichocarpa
Potri.001G317500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32260248-32270247 Populus trichocarpa
Potri.001G317500 10.0kb downstream 10.0kb downstream 16278 true Chr01: 32243970-32260247 Populus trichocarpa
Potri.001G317500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32243970-32253969 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459803 5262 Malpighiales View MSA
124247313 5268 Malvidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain