Gene : Potri.001G300900 P. trichocarpa v3.1
Defline:  (1 of 1) PF00389//PF07991 - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (2-Hacid_dh) // Acetohydroxy acid isomeroreductase, NADPH-binding domain (IlvN) Genomic Order:  3121
Name:  ? Potri.001G300900 Secondary Identifier:  ? PAC:37273468
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa SER-GLYSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa SERSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G300900 0.5kb upstream 0.5kb upstream 3763 true Chr01: 30488879-30492641 Populus trichocarpa
Potri.001G300900 0.5kb upstream 0.5kb upstream 500 false Chr01: 30488879-30489378 Populus trichocarpa
Potri.001G300900 0.5kb downstream 0.5kb downstream 3763 true Chr01: 30489379-30493141 Populus trichocarpa
Potri.001G300900 0.5kb downstream 0.5kb downstream 500 false Chr01: 30492642-30493141 Populus trichocarpa
Potri.001G300900 1.0kb upstream 1.0kb upstream 4263 true Chr01: 30488379-30492641 Populus trichocarpa
Potri.001G300900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30488379-30489378 Populus trichocarpa
Potri.001G300900 1.0kb downstream 1.0kb downstream 4263 true Chr01: 30489379-30493641 Populus trichocarpa
Potri.001G300900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30492642-30493641 Populus trichocarpa
Potri.001G300900 2.0kb upstream 2.0kb upstream 5263 true Chr01: 30487379-30492641 Populus trichocarpa
Potri.001G300900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30487379-30489378 Populus trichocarpa
Potri.001G300900 2.0kb downstream 2.0kb downstream 5263 true Chr01: 30489379-30494641 Populus trichocarpa
Potri.001G300900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30492642-30494641 Populus trichocarpa
Potri.001G300900 5.0kb upstream 5.0kb upstream 8263 true Chr01: 30484379-30492641 Populus trichocarpa
Potri.001G300900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30484379-30489378 Populus trichocarpa
Potri.001G300900 5.0kb downstream 5.0kb downstream 8263 true Chr01: 30489379-30497641 Populus trichocarpa
Potri.001G300900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30492642-30497641 Populus trichocarpa
Potri.001G300900 10.0kb upstream 10.0kb upstream 13263 true Chr01: 30479379-30492641 Populus trichocarpa
Potri.001G300900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30479379-30489378 Populus trichocarpa
Potri.001G300900 10.0kb downstream 10.0kb downstream 13263 true Chr01: 30489379-30502641 Populus trichocarpa
Potri.001G300900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30492642-30502641 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425869 5262 Malpighiales View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain