Gene : Potri.001G347800 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11822:SF5 - ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  3594
Name:  ? Potri.001G347800 Secondary Identifier:  ? PAC:37278915
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6549 Populus trichocarpa pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G347800 0.5kb upstream 0.5kb upstream 7248 true Chr01: 35352794-35360041 Populus trichocarpa
Potri.001G347800 0.5kb upstream 0.5kb upstream 500 false Chr01: 35359542-35360041 Populus trichocarpa
Potri.001G347800 0.5kb downstream 0.5kb downstream 7248 true Chr01: 35352294-35359541 Populus trichocarpa
Potri.001G347800 0.5kb downstream 0.5kb downstream 500 false Chr01: 35352294-35352793 Populus trichocarpa
Potri.001G347800 1.0kb upstream 1.0kb upstream 7748 true Chr01: 35352794-35360541 Populus trichocarpa
Potri.001G347800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35359542-35360541 Populus trichocarpa
Potri.001G347800 1.0kb downstream 1.0kb downstream 7748 true Chr01: 35351794-35359541 Populus trichocarpa
Potri.001G347800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35351794-35352793 Populus trichocarpa
Potri.001G347800 2.0kb upstream 2.0kb upstream 8748 true Chr01: 35352794-35361541 Populus trichocarpa
Potri.001G347800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35359542-35361541 Populus trichocarpa
Potri.001G347800 2.0kb downstream 2.0kb downstream 8748 true Chr01: 35350794-35359541 Populus trichocarpa
Potri.001G347800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35350794-35352793 Populus trichocarpa
Potri.001G347800 5.0kb upstream 5.0kb upstream 11748 true Chr01: 35352794-35364541 Populus trichocarpa
Potri.001G347800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35359542-35364541 Populus trichocarpa
Potri.001G347800 5.0kb downstream 5.0kb downstream 11748 true Chr01: 35347794-35359541 Populus trichocarpa
Potri.001G347800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35347794-35352793 Populus trichocarpa
Potri.001G347800 10.0kb upstream 10.0kb upstream 16748 true Chr01: 35352794-35369541 Populus trichocarpa
Potri.001G347800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35359542-35369541 Populus trichocarpa
Potri.001G347800 10.0kb downstream 10.0kb downstream 16748 true Chr01: 35342794-35359541 Populus trichocarpa
Potri.001G347800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35342794-35352793 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
122456069 5262 Malpighiales View MSA
124253580 5268 Malvidae View MSA
124066348 5270 Rosid View MSA
123740516 5271 Pentapetalae View MSA
122791819 5272 Eudicot View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain