Gene : Potri.001G333500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR10742:SF229 - PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  3450
Name:  ? Potri.001G333500 Secondary Identifier:  ? PAC:37277028
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  
Ptrichocarpa HEME-BIOSYNTHESIS-II Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G333500 0.5kb upstream 0.5kb upstream 7448 true Chr01: 33671814-33679261 Populus trichocarpa
Potri.001G333500 0.5kb upstream 0.5kb upstream 500 false Chr01: 33678762-33679261 Populus trichocarpa
Potri.001G333500 0.5kb downstream 0.5kb downstream 7448 true Chr01: 33671314-33678761 Populus trichocarpa
Potri.001G333500 0.5kb downstream 0.5kb downstream 500 false Chr01: 33671314-33671813 Populus trichocarpa
Potri.001G333500 1.0kb upstream 1.0kb upstream 7948 true Chr01: 33671814-33679761 Populus trichocarpa
Potri.001G333500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33678762-33679761 Populus trichocarpa
Potri.001G333500 1.0kb downstream 1.0kb downstream 7948 true Chr01: 33670814-33678761 Populus trichocarpa
Potri.001G333500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33670814-33671813 Populus trichocarpa
Potri.001G333500 2.0kb upstream 2.0kb upstream 8948 true Chr01: 33671814-33680761 Populus trichocarpa
Potri.001G333500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33678762-33680761 Populus trichocarpa
Potri.001G333500 2.0kb downstream 2.0kb downstream 8948 true Chr01: 33669814-33678761 Populus trichocarpa
Potri.001G333500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33669814-33671813 Populus trichocarpa
Potri.001G333500 5.0kb upstream 5.0kb upstream 11948 true Chr01: 33671814-33683761 Populus trichocarpa
Potri.001G333500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33678762-33683761 Populus trichocarpa
Potri.001G333500 5.0kb downstream 5.0kb downstream 11948 true Chr01: 33666814-33678761 Populus trichocarpa
Potri.001G333500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33666814-33671813 Populus trichocarpa
Potri.001G333500 10.0kb upstream 10.0kb upstream 16948 true Chr01: 33671814-33688761 Populus trichocarpa
Potri.001G333500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33678762-33688761 Populus trichocarpa
Potri.001G333500 10.0kb downstream 10.0kb downstream 16948 true Chr01: 33661814-33678761 Populus trichocarpa
Potri.001G333500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33661814-33671813 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462718 5262 Malpighiales View MSA
124241673 5268 Malvidae View MSA
124068806 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain