Gene : Potri.001G442900 P. trichocarpa v3.1
Defline:  (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) Genomic Order:  4582
Name:  ? Potri.001G442900 Secondary Identifier:  ? PAC:37276311
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G442900 0.5kb upstream 0.5kb upstream 11456 true Chr01: 47406392-47417847 Populus trichocarpa
Potri.001G442900 0.5kb upstream 0.5kb upstream 500 false Chr01: 47417348-47417847 Populus trichocarpa
Potri.001G442900 0.5kb downstream 0.5kb downstream 11456 true Chr01: 47405892-47417347 Populus trichocarpa
Potri.001G442900 0.5kb downstream 0.5kb downstream 500 false Chr01: 47405892-47406391 Populus trichocarpa
Potri.001G442900 1.0kb upstream 1.0kb upstream 11956 true Chr01: 47406392-47418347 Populus trichocarpa
Potri.001G442900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47417348-47418347 Populus trichocarpa
Potri.001G442900 1.0kb downstream 1.0kb downstream 11956 true Chr01: 47405392-47417347 Populus trichocarpa
Potri.001G442900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47405392-47406391 Populus trichocarpa
Potri.001G442900 2.0kb upstream 2.0kb upstream 12956 true Chr01: 47406392-47419347 Populus trichocarpa
Potri.001G442900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47417348-47419347 Populus trichocarpa
Potri.001G442900 2.0kb downstream 2.0kb downstream 12956 true Chr01: 47404392-47417347 Populus trichocarpa
Potri.001G442900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47404392-47406391 Populus trichocarpa
Potri.001G442900 5.0kb upstream 5.0kb upstream 15956 true Chr01: 47406392-47422347 Populus trichocarpa
Potri.001G442900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47417348-47422347 Populus trichocarpa
Potri.001G442900 5.0kb downstream 5.0kb downstream 15956 true Chr01: 47401392-47417347 Populus trichocarpa
Potri.001G442900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47401392-47406391 Populus trichocarpa
Potri.001G442900 10.0kb upstream 10.0kb upstream 20956 true Chr01: 47406392-47427347 Populus trichocarpa
Potri.001G442900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47417348-47427347 Populus trichocarpa
Potri.001G442900 10.0kb downstream 10.0kb downstream 20956 true Chr01: 47396392-47417347 Populus trichocarpa
Potri.001G442900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47396392-47406391 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122404551 5262 Malpighiales View MSA
124252809 5268 Malvidae View MSA
124068245 5270 Rosid View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain