Protein Family : VPS54 124252809

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  20

20 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30160.t000004 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) R. communis v0.1 14550   30160: 296286-310835
orange1.1g001697m.g (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 C. sinensis v1.1 10955   scaffold00008: 2283583-2294537
AT4G19490 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) A. thaliana TAIR10 VPS54 7726   Chr4: 10615796-10623521
Thhalv10024300m.g (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 E. salsugineum v1.0 7879   scaffold_1: 8816576-8824454
Ciclev10014122m.g (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 C. clementina v1.0 10442   scaffold_2: 30911111-30921552
Lus10038410.g (1 of 3) PTHR12965 - VACUOLAR PROTEIN SORTING 54 L. usitatissimum v1.0 6974   scaffold28: 1182143-1189116
Lus10023394.g (1 of 1) PF07928//PF10475 - Vps54-like protein (Vps54) // Protein of unknown function N-terminal domain (DUF2450) (DUF2450) L. usitatissimum v1.0 6682   scaffold98: 889418-896099
Gorai.011G004800 (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 G. raimondii v2.1 10578   Chr11: 392339-402916
Thecc1EG026923 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) T. cacao v1.1 21765   scaffold_6: 326901-348665
Araha.8600s0004 (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 A. halleri v1.1 7697   Scaffold8600: 13544-21240
Brara.A01043 (1 of 2) PTHR12965 - VACUOLAR PROTEIN SORTING 54 B. rapa FPsc v1.3 7381   A01: 5492262-5499642
Brara.K01766 (1 of 2) PTHR12965 - VACUOLAR PROTEIN SORTING 54 B. rapa FPsc v1.3 6193   Scaffold87669: 210676-216868
Bostr.30275s0428 (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 B. stricta v1.2 7811   Scaffold30275: 2640471-2648281
SapurV1A.0131s0110 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) S. purpurea v1.0 10954   chr11: 16751081-16762034
AL7G34630 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) A. lyrata v2.1 7766   scaffold_7: 10187328-10195093
Potri.001G442900 (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) P. trichocarpa v3.1 10956   Chr01: 47406392-47417347
Potri.011G154000 (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) P. trichocarpa v3.1 10925   Chr11: 17269003-17279927
Podel.01G463400 (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) P. deltoides WV94 v2.1 10051   Chr01: 50007994-50018044
Podel.11G150900 (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) P. deltoides WV94 v2.1 10780   Chr11: 17179051-17189830
Carub.0007s2172 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) C. rubella v1.1 7629   scaffold_7: 8210295-8217923

20 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10024300m E. salsugineum v1.0 124252809 VPS54 1 5268 Malvidae
Lus10023394 L. usitatissimum v1.0 124252809 VPS54 2 5268 Malvidae
Gorai.011G004800.1 G. raimondii v2.1 124252809 VPS54 1 5268 Malvidae
Brara.K01766.1.p B. rapa FPsc v1.3 124252809 VPS54 2 5268 Malvidae
Potri.011G154000.6.p P. trichocarpa v3.1 124252809 VPS54 2 5268 Malvidae
Potri.001G442900.7.p P. trichocarpa v3.1 124252809 VPS54 2 5268 Malvidae
Podel.11G150900.1.p P. deltoides WV94 v2.1 124252809 VPS54 2 5268 Malvidae
30160.m000431 R. communis v0.1 124252809 VPS54 1 5268 Malvidae
orange1.1g001697m C. sinensis v1.1 124252809 VPS54 1 5268 Malvidae
AT4G19490.1 A. thaliana TAIR10 124252809 VPS54 1 5268 Malvidae
Ciclev10014122m C. clementina v1.0 124252809 VPS54 1 5268 Malvidae
Lus10038410 L. usitatissimum v1.0 124252809 VPS54 2 5268 Malvidae
Thecc1EG026923t1 T. cacao v1.1 124252809 VPS54 1 5268 Malvidae
Araha.8600s0004.1.p A. halleri v1.1 124252809 VPS54 1 5268 Malvidae
Brara.A01043.1.p B. rapa FPsc v1.3 124252809 VPS54 2 5268 Malvidae
Bostr.30275s0428.1.p B. stricta v1.2 124252809 VPS54 1 5268 Malvidae
SapurV1A.0131s0110.1.p S. purpurea v1.0 124252809 VPS54 1 5268 Malvidae
AL7G34630.t1 A. lyrata v2.1 124252809 VPS54 1 5268 Malvidae
Podel.01G463400.1.p P. deltoides WV94 v2.1 124252809 VPS54 2 5268 Malvidae
Carub.0007s2172.1.p C. rubella v1.1 124252809 VPS54 1 5268 Malvidae