Gene : Thecc1EG026923 T. cacao v1.1
Defline:  (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) Genomic Order:  29
Name:  ? Thecc1EG026923 Secondary Identifier:  ? PAC:27438061
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026923 0.5kb upstream 0.5kb upstream 22265 true scaffold_6: 326401-348665 Theobroma cacao
Thecc1EG026923 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 326401-326900 Theobroma cacao
Thecc1EG026923 0.5kb downstream 0.5kb downstream 22265 true scaffold_6: 326901-349165 Theobroma cacao
Thecc1EG026923 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 348666-349165 Theobroma cacao
Thecc1EG026923 1.0kb upstream 1.0kb upstream 22765 true scaffold_6: 325901-348665 Theobroma cacao
Thecc1EG026923 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 325901-326900 Theobroma cacao
Thecc1EG026923 1.0kb downstream 1.0kb downstream 22765 true scaffold_6: 326901-349665 Theobroma cacao
Thecc1EG026923 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 348666-349665 Theobroma cacao
Thecc1EG026923 2.0kb upstream 2.0kb upstream 23765 true scaffold_6: 324901-348665 Theobroma cacao
Thecc1EG026923 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 324901-326900 Theobroma cacao
Thecc1EG026923 2.0kb downstream 2.0kb downstream 23765 true scaffold_6: 326901-350665 Theobroma cacao
Thecc1EG026923 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 348666-350665 Theobroma cacao
Thecc1EG026923 5.0kb upstream 5.0kb upstream 26765 true scaffold_6: 321901-348665 Theobroma cacao
Thecc1EG026923 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 321901-326900 Theobroma cacao
Thecc1EG026923 5.0kb downstream 5.0kb downstream 26765 true scaffold_6: 326901-353665 Theobroma cacao
Thecc1EG026923 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 348666-353665 Theobroma cacao
Thecc1EG026923 10.0kb upstream 10.0kb upstream 31765 true scaffold_6: 316901-348665 Theobroma cacao
Thecc1EG026923 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 316901-326900 Theobroma cacao
Thecc1EG026923 10.0kb downstream 10.0kb downstream 31765 true scaffold_6: 326901-358665 Theobroma cacao
Thecc1EG026923 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 348666-358665 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828997 5264 Brassicales-Malvales View MSA
124345001 5266 SBM View MSA
124252809 5268 Malvidae View MSA
124068245 5270 Rosid View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain