Gene : Potri.011G154000 P. trichocarpa v3.1
Defline:  (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) Genomic Order:  1574
Name:  ? Potri.011G154000 Secondary Identifier:  ? PAC:37239384
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G154000 0.5kb upstream 0.5kb upstream 11425 true Chr11: 17268503-17279927 Populus trichocarpa
Potri.011G154000 0.5kb upstream 0.5kb upstream 500 false Chr11: 17268503-17269002 Populus trichocarpa
Potri.011G154000 0.5kb downstream 0.5kb downstream 11425 true Chr11: 17269003-17280427 Populus trichocarpa
Potri.011G154000 0.5kb downstream 0.5kb downstream 500 false Chr11: 17279928-17280427 Populus trichocarpa
Potri.011G154000 1.0kb upstream 1.0kb upstream 11925 true Chr11: 17268003-17279927 Populus trichocarpa
Potri.011G154000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17268003-17269002 Populus trichocarpa
Potri.011G154000 1.0kb downstream 1.0kb downstream 11925 true Chr11: 17269003-17280927 Populus trichocarpa
Potri.011G154000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17279928-17280927 Populus trichocarpa
Potri.011G154000 2.0kb upstream 2.0kb upstream 12925 true Chr11: 17267003-17279927 Populus trichocarpa
Potri.011G154000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17267003-17269002 Populus trichocarpa
Potri.011G154000 2.0kb downstream 2.0kb downstream 12925 true Chr11: 17269003-17281927 Populus trichocarpa
Potri.011G154000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17279928-17281927 Populus trichocarpa
Potri.011G154000 5.0kb upstream 5.0kb upstream 15925 true Chr11: 17264003-17279927 Populus trichocarpa
Potri.011G154000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17264003-17269002 Populus trichocarpa
Potri.011G154000 5.0kb downstream 5.0kb downstream 15925 true Chr11: 17269003-17284927 Populus trichocarpa
Potri.011G154000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17279928-17284927 Populus trichocarpa
Potri.011G154000 10.0kb upstream 10.0kb upstream 20925 true Chr11: 17259003-17279927 Populus trichocarpa
Potri.011G154000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17259003-17269002 Populus trichocarpa
Potri.011G154000 10.0kb downstream 10.0kb downstream 20925 true Chr11: 17269003-17289927 Populus trichocarpa
Potri.011G154000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17279928-17289927 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459826 5262 Malpighiales View MSA
124252809 5268 Malvidae View MSA
124068245 5270 Rosid View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain