Gene : Potri.001G420300 P. trichocarpa v3.1
Defline:  (1 of 3) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  4340
Name:  ? Potri.001G420300 Secondary Identifier:  ? PAC:37278464
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRPSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G420300 0.5kb upstream 0.5kb upstream 3135 true Chr01: 44560637-44563771 Populus trichocarpa
Potri.001G420300 0.5kb upstream 0.5kb upstream 500 false Chr01: 44563272-44563771 Populus trichocarpa
Potri.001G420300 0.5kb downstream 0.5kb downstream 3135 true Chr01: 44560137-44563271 Populus trichocarpa
Potri.001G420300 0.5kb downstream 0.5kb downstream 500 false Chr01: 44560137-44560636 Populus trichocarpa
Potri.001G420300 1.0kb upstream 1.0kb upstream 3635 true Chr01: 44560637-44564271 Populus trichocarpa
Potri.001G420300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44563272-44564271 Populus trichocarpa
Potri.001G420300 1.0kb downstream 1.0kb downstream 3635 true Chr01: 44559637-44563271 Populus trichocarpa
Potri.001G420300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44559637-44560636 Populus trichocarpa
Potri.001G420300 2.0kb upstream 2.0kb upstream 4635 true Chr01: 44560637-44565271 Populus trichocarpa
Potri.001G420300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44563272-44565271 Populus trichocarpa
Potri.001G420300 2.0kb downstream 2.0kb downstream 4635 true Chr01: 44558637-44563271 Populus trichocarpa
Potri.001G420300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44558637-44560636 Populus trichocarpa
Potri.001G420300 5.0kb upstream 5.0kb upstream 7635 true Chr01: 44560637-44568271 Populus trichocarpa
Potri.001G420300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44563272-44568271 Populus trichocarpa
Potri.001G420300 5.0kb downstream 5.0kb downstream 7635 true Chr01: 44555637-44563271 Populus trichocarpa
Potri.001G420300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44555637-44560636 Populus trichocarpa
Potri.001G420300 10.0kb upstream 10.0kb upstream 12635 true Chr01: 44560637-44573271 Populus trichocarpa
Potri.001G420300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44563272-44573271 Populus trichocarpa
Potri.001G420300 10.0kb downstream 10.0kb downstream 12635 true Chr01: 44550637-44563271 Populus trichocarpa
Potri.001G420300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44550637-44560636 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122431134 5262 Malpighiales View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain