Gene : Potri.001G412900 P. trichocarpa v3.1

Defline:  (1 of 4) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  4260
Name:  ? Potri.001G412900 Secondary Identifier:  ? PAC:37279296

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6054 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-21 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-389 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G412900 0.5kb upstream 0.5kb upstream 5346 true Chr01: 43756364-43761709 Populus trichocarpa
Potri.001G412900 0.5kb upstream 0.5kb upstream 500 false Chr01: 43756364-43756863 Populus trichocarpa
Potri.001G412900 0.5kb downstream 0.5kb downstream 5346 true Chr01: 43756864-43762209 Populus trichocarpa
Potri.001G412900 0.5kb downstream 0.5kb downstream 500 false Chr01: 43761710-43762209 Populus trichocarpa
Potri.001G412900 1.0kb upstream 1.0kb upstream 5846 true Chr01: 43755864-43761709 Populus trichocarpa
Potri.001G412900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43755864-43756863 Populus trichocarpa
Potri.001G412900 1.0kb downstream 1.0kb downstream 5846 true Chr01: 43756864-43762709 Populus trichocarpa
Potri.001G412900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43761710-43762709 Populus trichocarpa
Potri.001G412900 2.0kb upstream 2.0kb upstream 6846 true Chr01: 43754864-43761709 Populus trichocarpa
Potri.001G412900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43754864-43756863 Populus trichocarpa
Potri.001G412900 2.0kb downstream 2.0kb downstream 6846 true Chr01: 43756864-43763709 Populus trichocarpa
Potri.001G412900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43761710-43763709 Populus trichocarpa
Potri.001G412900 5.0kb upstream 5.0kb upstream 9846 true Chr01: 43751864-43761709 Populus trichocarpa
Potri.001G412900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43751864-43756863 Populus trichocarpa
Potri.001G412900 5.0kb downstream 5.0kb downstream 9846 true Chr01: 43756864-43766709 Populus trichocarpa
Potri.001G412900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43761710-43766709 Populus trichocarpa
Potri.001G412900 10.0kb upstream 10.0kb upstream 14846 true Chr01: 43746864-43761709 Populus trichocarpa
Potri.001G412900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43746864-43756863 Populus trichocarpa
Potri.001G412900 10.0kb downstream 10.0kb downstream 14846 true Chr01: 43756864-43771709 Populus trichocarpa
Potri.001G412900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43761710-43771709 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122402846 5262 Malpighiales View MSA
124245156 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain