Gene : Potri.001G411500 P. trichocarpa v3.1
Defline:  (1 of 3) PF00954//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // PAN-like domain (PAN_2) Genomic Order:  4246
Name:  ? Potri.001G411500 Secondary Identifier:  ? PAC:37279634
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G411500 0.5kb upstream 0.5kb upstream 1264 true Chr01: 43622498-43623761 Populus trichocarpa
Potri.001G411500 0.5kb upstream 0.5kb upstream 500 false Chr01: 43622498-43622997 Populus trichocarpa
Potri.001G411500 0.5kb downstream 0.5kb downstream 1264 true Chr01: 43622998-43624261 Populus trichocarpa
Potri.001G411500 0.5kb downstream 0.5kb downstream 500 false Chr01: 43623762-43624261 Populus trichocarpa
Potri.001G411500 1.0kb upstream 1.0kb upstream 1764 true Chr01: 43621998-43623761 Populus trichocarpa
Potri.001G411500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43621998-43622997 Populus trichocarpa
Potri.001G411500 1.0kb downstream 1.0kb downstream 1764 true Chr01: 43622998-43624761 Populus trichocarpa
Potri.001G411500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43623762-43624761 Populus trichocarpa
Potri.001G411500 2.0kb upstream 2.0kb upstream 2764 true Chr01: 43620998-43623761 Populus trichocarpa
Potri.001G411500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43620998-43622997 Populus trichocarpa
Potri.001G411500 2.0kb downstream 2.0kb downstream 2764 true Chr01: 43622998-43625761 Populus trichocarpa
Potri.001G411500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43623762-43625761 Populus trichocarpa
Potri.001G411500 5.0kb upstream 5.0kb upstream 5764 true Chr01: 43617998-43623761 Populus trichocarpa
Potri.001G411500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43617998-43622997 Populus trichocarpa
Potri.001G411500 5.0kb downstream 5.0kb downstream 5764 true Chr01: 43622998-43628761 Populus trichocarpa
Potri.001G411500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43623762-43628761 Populus trichocarpa
Potri.001G411500 10.0kb upstream 10.0kb upstream 10764 true Chr01: 43612998-43623761 Populus trichocarpa
Potri.001G411500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43612998-43622997 Populus trichocarpa
Potri.001G411500 10.0kb downstream 10.0kb downstream 10764 true Chr01: 43622998-43633761 Populus trichocarpa
Potri.001G411500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43623762-43633761 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122391320 5262 Malpighiales Singleton cluster - no MSA
124188992 5268 Malvidae Singleton cluster - no MSA
124074659 5270 Rosid View MSA
123753273 5271 Pentapetalae View MSA
122775025 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain