Gene : Potri.002G016300 P. trichocarpa v3.1

Defline:  (1 of 2) 2.1.1.142//2.1.1.143 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase // 24-methylenesterol C-methyltransferase / SMT(2) Genomic Order:  164
Name:  ? Potri.002G016300 Secondary Identifier:  ? PAC:37259825

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2541 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G016300 0.5kb upstream 0.5kb upstream 2681 true Chr02: 952489-955169 Populus trichocarpa
Potri.002G016300 0.5kb upstream 0.5kb upstream 500 false Chr02: 952489-952988 Populus trichocarpa
Potri.002G016300 0.5kb downstream 0.5kb downstream 2681 true Chr02: 952989-955669 Populus trichocarpa
Potri.002G016300 0.5kb downstream 0.5kb downstream 500 false Chr02: 955170-955669 Populus trichocarpa
Potri.002G016300 1.0kb upstream 1.0kb upstream 3181 true Chr02: 951989-955169 Populus trichocarpa
Potri.002G016300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 951989-952988 Populus trichocarpa
Potri.002G016300 1.0kb downstream 1.0kb downstream 3181 true Chr02: 952989-956169 Populus trichocarpa
Potri.002G016300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 955170-956169 Populus trichocarpa
Potri.002G016300 2.0kb upstream 2.0kb upstream 4181 true Chr02: 950989-955169 Populus trichocarpa
Potri.002G016300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 950989-952988 Populus trichocarpa
Potri.002G016300 2.0kb downstream 2.0kb downstream 4181 true Chr02: 952989-957169 Populus trichocarpa
Potri.002G016300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 955170-957169 Populus trichocarpa
Potri.002G016300 5.0kb upstream 5.0kb upstream 7181 true Chr02: 947989-955169 Populus trichocarpa
Potri.002G016300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 947989-952988 Populus trichocarpa
Potri.002G016300 5.0kb downstream 5.0kb downstream 7181 true Chr02: 952989-960169 Populus trichocarpa
Potri.002G016300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 955170-960169 Populus trichocarpa
Potri.002G016300 10.0kb upstream 10.0kb upstream 12181 true Chr02: 942989-955169 Populus trichocarpa
Potri.002G016300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 942989-952988 Populus trichocarpa
Potri.002G016300 10.0kb downstream 10.0kb downstream 12181 true Chr02: 952989-965169 Populus trichocarpa
Potri.002G016300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 955170-965169 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450641 5262 Malpighiales View MSA
124253905 5268 Malvidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain