Gene : Potri.002G010200 P. trichocarpa v3.1

Defline:  (1 of 2) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3) Genomic Order:  102
Name:  ? Potri.002G010200 Secondary Identifier:  ? PAC:37256184

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G010200 0.5kb upstream 0.5kb upstream 3192 true Chr02: 603617-606808 Populus trichocarpa
Potri.002G010200 0.5kb upstream 0.5kb upstream 500 false Chr02: 606309-606808 Populus trichocarpa
Potri.002G010200 0.5kb downstream 0.5kb downstream 3192 true Chr02: 603117-606308 Populus trichocarpa
Potri.002G010200 0.5kb downstream 0.5kb downstream 500 false Chr02: 603117-603616 Populus trichocarpa
Potri.002G010200 1.0kb upstream 1.0kb upstream 3692 true Chr02: 603617-607308 Populus trichocarpa
Potri.002G010200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 606309-607308 Populus trichocarpa
Potri.002G010200 1.0kb downstream 1.0kb downstream 3692 true Chr02: 602617-606308 Populus trichocarpa
Potri.002G010200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 602617-603616 Populus trichocarpa
Potri.002G010200 2.0kb upstream 2.0kb upstream 4692 true Chr02: 603617-608308 Populus trichocarpa
Potri.002G010200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 606309-608308 Populus trichocarpa
Potri.002G010200 2.0kb downstream 2.0kb downstream 4692 true Chr02: 601617-606308 Populus trichocarpa
Potri.002G010200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 601617-603616 Populus trichocarpa
Potri.002G010200 5.0kb upstream 5.0kb upstream 7692 true Chr02: 603617-611308 Populus trichocarpa
Potri.002G010200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 606309-611308 Populus trichocarpa
Potri.002G010200 5.0kb downstream 5.0kb downstream 7692 true Chr02: 598617-606308 Populus trichocarpa
Potri.002G010200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 598617-603616 Populus trichocarpa
Potri.002G010200 10.0kb upstream 10.0kb upstream 12692 true Chr02: 603617-616308 Populus trichocarpa
Potri.002G010200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 606309-616308 Populus trichocarpa
Potri.002G010200 10.0kb downstream 10.0kb downstream 12692 true Chr02: 593617-606308 Populus trichocarpa
Potri.002G010200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 593617-603616 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451684 5262 Malpighiales View MSA
124243625 5268 Malvidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain