Gene : Potri.001G458700 P. trichocarpa v3.1
Defline:  (1 of 11) PTHR31388:SF37 - PEROXIDASE 4-RELATED Genomic Order:  4742
Name:  ? Potri.001G458700 Secondary Identifier:  ? PAC:37277831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7214 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7445 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G458700 0.5kb upstream 0.5kb upstream 1745 true Chr01: 49219781-49221525 Populus trichocarpa
Potri.001G458700 0.5kb upstream 0.5kb upstream 500 false Chr01: 49219781-49220280 Populus trichocarpa
Potri.001G458700 0.5kb downstream 0.5kb downstream 1745 true Chr01: 49220281-49222025 Populus trichocarpa
Potri.001G458700 0.5kb downstream 0.5kb downstream 500 false Chr01: 49221526-49222025 Populus trichocarpa
Potri.001G458700 1.0kb upstream 1.0kb upstream 2245 true Chr01: 49219281-49221525 Populus trichocarpa
Potri.001G458700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49219281-49220280 Populus trichocarpa
Potri.001G458700 1.0kb downstream 1.0kb downstream 2245 true Chr01: 49220281-49222525 Populus trichocarpa
Potri.001G458700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49221526-49222525 Populus trichocarpa
Potri.001G458700 2.0kb upstream 2.0kb upstream 3245 true Chr01: 49218281-49221525 Populus trichocarpa
Potri.001G458700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49218281-49220280 Populus trichocarpa
Potri.001G458700 2.0kb downstream 2.0kb downstream 3245 true Chr01: 49220281-49223525 Populus trichocarpa
Potri.001G458700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49221526-49223525 Populus trichocarpa
Potri.001G458700 5.0kb upstream 5.0kb upstream 6245 true Chr01: 49215281-49221525 Populus trichocarpa
Potri.001G458700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49215281-49220280 Populus trichocarpa
Potri.001G458700 5.0kb downstream 5.0kb downstream 6245 true Chr01: 49220281-49226525 Populus trichocarpa
Potri.001G458700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49221526-49226525 Populus trichocarpa
Potri.001G458700 10.0kb upstream 10.0kb upstream 11245 true Chr01: 49210281-49221525 Populus trichocarpa
Potri.001G458700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49210281-49220280 Populus trichocarpa
Potri.001G458700 10.0kb downstream 10.0kb downstream 11245 true Chr01: 49220281-49231525 Populus trichocarpa
Potri.001G458700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49221526-49231525 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459762 5262 Malpighiales View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain