Gene : Potri.002G093300 P. trichocarpa v3.1

Defline:  (1 of 3) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  974
Name:  ? Potri.002G093300 Secondary Identifier:  ? PAC:37256646

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G093300 0.5kb upstream 0.5kb upstream 4742 true Chr02: 6675226-6679967 Populus trichocarpa
Potri.002G093300 0.5kb upstream 0.5kb upstream 500 false Chr02: 6675226-6675725 Populus trichocarpa
Potri.002G093300 0.5kb downstream 0.5kb downstream 4742 true Chr02: 6675726-6680467 Populus trichocarpa
Potri.002G093300 0.5kb downstream 0.5kb downstream 500 false Chr02: 6679968-6680467 Populus trichocarpa
Potri.002G093300 1.0kb upstream 1.0kb upstream 5242 true Chr02: 6674726-6679967 Populus trichocarpa
Potri.002G093300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6674726-6675725 Populus trichocarpa
Potri.002G093300 1.0kb downstream 1.0kb downstream 5242 true Chr02: 6675726-6680967 Populus trichocarpa
Potri.002G093300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6679968-6680967 Populus trichocarpa
Potri.002G093300 2.0kb upstream 2.0kb upstream 6242 true Chr02: 6673726-6679967 Populus trichocarpa
Potri.002G093300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6673726-6675725 Populus trichocarpa
Potri.002G093300 2.0kb downstream 2.0kb downstream 6242 true Chr02: 6675726-6681967 Populus trichocarpa
Potri.002G093300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6679968-6681967 Populus trichocarpa
Potri.002G093300 5.0kb upstream 5.0kb upstream 9242 true Chr02: 6670726-6679967 Populus trichocarpa
Potri.002G093300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6670726-6675725 Populus trichocarpa
Potri.002G093300 5.0kb downstream 5.0kb downstream 9242 true Chr02: 6675726-6684967 Populus trichocarpa
Potri.002G093300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6679968-6684967 Populus trichocarpa
Potri.002G093300 10.0kb upstream 10.0kb upstream 14242 true Chr02: 6665726-6679967 Populus trichocarpa
Potri.002G093300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6665726-6675725 Populus trichocarpa
Potri.002G093300 10.0kb downstream 10.0kb downstream 14242 true Chr02: 6675726-6689967 Populus trichocarpa
Potri.002G093300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6679968-6689967 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454243 5262 Malpighiales View MSA
124251254 5268 Malvidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain