Gene : Potri.002G070500 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  737
Name:  ? Potri.002G070500 Secondary Identifier:  ? PAC:37258857
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G070500 0.5kb upstream 0.5kb upstream 2085 true Chr02: 4859585-4861669 Populus trichocarpa
Potri.002G070500 0.5kb upstream 0.5kb upstream 500 false Chr02: 4859585-4860084 Populus trichocarpa
Potri.002G070500 0.5kb downstream 0.5kb downstream 2085 true Chr02: 4860085-4862169 Populus trichocarpa
Potri.002G070500 0.5kb downstream 0.5kb downstream 500 false Chr02: 4861670-4862169 Populus trichocarpa
Potri.002G070500 1.0kb upstream 1.0kb upstream 2585 true Chr02: 4859085-4861669 Populus trichocarpa
Potri.002G070500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4859085-4860084 Populus trichocarpa
Potri.002G070500 1.0kb downstream 1.0kb downstream 2585 true Chr02: 4860085-4862669 Populus trichocarpa
Potri.002G070500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4861670-4862669 Populus trichocarpa
Potri.002G070500 2.0kb upstream 2.0kb upstream 3585 true Chr02: 4858085-4861669 Populus trichocarpa
Potri.002G070500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4858085-4860084 Populus trichocarpa
Potri.002G070500 2.0kb downstream 2.0kb downstream 3585 true Chr02: 4860085-4863669 Populus trichocarpa
Potri.002G070500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4861670-4863669 Populus trichocarpa
Potri.002G070500 5.0kb upstream 5.0kb upstream 6585 true Chr02: 4855085-4861669 Populus trichocarpa
Potri.002G070500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4855085-4860084 Populus trichocarpa
Potri.002G070500 5.0kb downstream 5.0kb downstream 6585 true Chr02: 4860085-4866669 Populus trichocarpa
Potri.002G070500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4861670-4866669 Populus trichocarpa
Potri.002G070500 10.0kb upstream 10.0kb upstream 11585 true Chr02: 4850085-4861669 Populus trichocarpa
Potri.002G070500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4850085-4860084 Populus trichocarpa
Potri.002G070500 10.0kb downstream 10.0kb downstream 11585 true Chr02: 4860085-4871669 Populus trichocarpa
Potri.002G070500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4861670-4871669 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455916 5262 Malpighiales View MSA
124246768 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain