Gene : Potri.002G160800 P. trichocarpa v3.1
Defline:  (1 of 2) K13034 - L-3-cyanoalanine synthase/ cysteine synthase (ATCYSC1) Genomic Order:  1688
Name:  ? Potri.002G160800 Secondary Identifier:  ? PAC:37257874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ASPSYNII-PWY Populus trichocarpa pathologic  
Ptrichocarpa P401-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G160800 0.5kb upstream 0.5kb upstream 4205 true Chr02: 12125454-12129658 Populus trichocarpa
Potri.002G160800 0.5kb upstream 0.5kb upstream 500 false Chr02: 12125454-12125953 Populus trichocarpa
Potri.002G160800 0.5kb downstream 0.5kb downstream 4205 true Chr02: 12125954-12130158 Populus trichocarpa
Potri.002G160800 0.5kb downstream 0.5kb downstream 500 false Chr02: 12129659-12130158 Populus trichocarpa
Potri.002G160800 1.0kb upstream 1.0kb upstream 4705 true Chr02: 12124954-12129658 Populus trichocarpa
Potri.002G160800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12124954-12125953 Populus trichocarpa
Potri.002G160800 1.0kb downstream 1.0kb downstream 4705 true Chr02: 12125954-12130658 Populus trichocarpa
Potri.002G160800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12129659-12130658 Populus trichocarpa
Potri.002G160800 2.0kb upstream 2.0kb upstream 5705 true Chr02: 12123954-12129658 Populus trichocarpa
Potri.002G160800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12123954-12125953 Populus trichocarpa
Potri.002G160800 2.0kb downstream 2.0kb downstream 5705 true Chr02: 12125954-12131658 Populus trichocarpa
Potri.002G160800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12129659-12131658 Populus trichocarpa
Potri.002G160800 5.0kb upstream 5.0kb upstream 8705 true Chr02: 12120954-12129658 Populus trichocarpa
Potri.002G160800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12120954-12125953 Populus trichocarpa
Potri.002G160800 5.0kb downstream 5.0kb downstream 8705 true Chr02: 12125954-12134658 Populus trichocarpa
Potri.002G160800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12129659-12134658 Populus trichocarpa
Potri.002G160800 10.0kb upstream 10.0kb upstream 13705 true Chr02: 12115954-12129658 Populus trichocarpa
Potri.002G160800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12115954-12125953 Populus trichocarpa
Potri.002G160800 10.0kb downstream 10.0kb downstream 13705 true Chr02: 12125954-12139658 Populus trichocarpa
Potri.002G160800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12129659-12139658 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
122463832 5262 Malpighiales View MSA
124244818 5268 Malvidae View MSA
124062527 5270 Rosid View MSA
123753614 5271 Pentapetalae View MSA
122790357 5272 Eudicot View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain