Gene : Potri.002G145700 P. trichocarpa v3.1

Defline:  (1 of 6) PTHR31707:SF35 - PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED Genomic Order:  1527
Name:  ? Potri.002G145700 Secondary Identifier:  ? PAC:37256739

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G145700 0.5kb upstream 0.5kb upstream 2121 true Chr02: 10863835-10865955 Populus trichocarpa
Potri.002G145700 0.5kb upstream 0.5kb upstream 500 false Chr02: 10863835-10864334 Populus trichocarpa
Potri.002G145700 0.5kb downstream 0.5kb downstream 2121 true Chr02: 10864335-10866455 Populus trichocarpa
Potri.002G145700 0.5kb downstream 0.5kb downstream 500 false Chr02: 10865956-10866455 Populus trichocarpa
Potri.002G145700 1.0kb upstream 1.0kb upstream 2621 true Chr02: 10863335-10865955 Populus trichocarpa
Potri.002G145700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10863335-10864334 Populus trichocarpa
Potri.002G145700 1.0kb downstream 1.0kb downstream 2621 true Chr02: 10864335-10866955 Populus trichocarpa
Potri.002G145700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10865956-10866955 Populus trichocarpa
Potri.002G145700 2.0kb upstream 2.0kb upstream 3621 true Chr02: 10862335-10865955 Populus trichocarpa
Potri.002G145700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10862335-10864334 Populus trichocarpa
Potri.002G145700 2.0kb downstream 2.0kb downstream 3621 true Chr02: 10864335-10867955 Populus trichocarpa
Potri.002G145700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10865956-10867955 Populus trichocarpa
Potri.002G145700 5.0kb upstream 5.0kb upstream 6621 true Chr02: 10859335-10865955 Populus trichocarpa
Potri.002G145700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10859335-10864334 Populus trichocarpa
Potri.002G145700 5.0kb downstream 5.0kb downstream 6621 true Chr02: 10864335-10870955 Populus trichocarpa
Potri.002G145700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10865956-10870955 Populus trichocarpa
Potri.002G145700 10.0kb upstream 10.0kb upstream 11621 true Chr02: 10854335-10865955 Populus trichocarpa
Potri.002G145700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10854335-10864334 Populus trichocarpa
Potri.002G145700 10.0kb downstream 10.0kb downstream 11621 true Chr02: 10864335-10875955 Populus trichocarpa
Potri.002G145700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10865956-10875955 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449447 5262 Malpighiales View MSA
124244042 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain