Gene : Potri.002G219200 P. trichocarpa v3.1

Defline:  (1 of 3) K03236 - translation initiation factor 1A (EIF1A) Genomic Order:  2285
Name:  ? Potri.002G219200 Secondary Identifier:  ? PAC:37258652

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G219200 0.5kb upstream 0.5kb upstream 2532 true Chr02: 20402386-20404917 Populus trichocarpa
Potri.002G219200 0.5kb upstream 0.5kb upstream 500 false Chr02: 20404418-20404917 Populus trichocarpa
Potri.002G219200 0.5kb downstream 0.5kb downstream 2532 true Chr02: 20401886-20404417 Populus trichocarpa
Potri.002G219200 0.5kb downstream 0.5kb downstream 500 false Chr02: 20401886-20402385 Populus trichocarpa
Potri.002G219200 1.0kb upstream 1.0kb upstream 3032 true Chr02: 20402386-20405417 Populus trichocarpa
Potri.002G219200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20404418-20405417 Populus trichocarpa
Potri.002G219200 1.0kb downstream 1.0kb downstream 3032 true Chr02: 20401386-20404417 Populus trichocarpa
Potri.002G219200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20401386-20402385 Populus trichocarpa
Potri.002G219200 2.0kb upstream 2.0kb upstream 4032 true Chr02: 20402386-20406417 Populus trichocarpa
Potri.002G219200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20404418-20406417 Populus trichocarpa
Potri.002G219200 2.0kb downstream 2.0kb downstream 4032 true Chr02: 20400386-20404417 Populus trichocarpa
Potri.002G219200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20400386-20402385 Populus trichocarpa
Potri.002G219200 5.0kb upstream 5.0kb upstream 7032 true Chr02: 20402386-20409417 Populus trichocarpa
Potri.002G219200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20404418-20409417 Populus trichocarpa
Potri.002G219200 5.0kb downstream 5.0kb downstream 7032 true Chr02: 20397386-20404417 Populus trichocarpa
Potri.002G219200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20397386-20402385 Populus trichocarpa
Potri.002G219200 10.0kb upstream 10.0kb upstream 12032 true Chr02: 20402386-20414417 Populus trichocarpa
Potri.002G219200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20404418-20414417 Populus trichocarpa
Potri.002G219200 10.0kb downstream 10.0kb downstream 12032 true Chr02: 20392386-20404417 Populus trichocarpa
Potri.002G219200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20392386-20402385 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451432 5262 Malpighiales View MSA
124243826 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain