Gene : Potri.003G057100 P. trichocarpa v3.1

Defline:  (1 of 4) PTHR31896//PTHR31896:SF12 - FAMILY NOT NAMED // ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  604
Name:  ? Potri.003G057100 Secondary Identifier:  ? PAC:37236776

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-361 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6040 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G057100 0.5kb upstream 0.5kb upstream 2216 true Chr03: 8498465-8500680 Populus trichocarpa
Potri.003G057100 0.5kb upstream 0.5kb upstream 500 false Chr03: 8498465-8498964 Populus trichocarpa
Potri.003G057100 0.5kb downstream 0.5kb downstream 2216 true Chr03: 8498965-8501180 Populus trichocarpa
Potri.003G057100 0.5kb downstream 0.5kb downstream 500 false Chr03: 8500681-8501180 Populus trichocarpa
Potri.003G057100 1.0kb upstream 1.0kb upstream 2716 true Chr03: 8497965-8500680 Populus trichocarpa
Potri.003G057100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8497965-8498964 Populus trichocarpa
Potri.003G057100 1.0kb downstream 1.0kb downstream 2716 true Chr03: 8498965-8501680 Populus trichocarpa
Potri.003G057100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8500681-8501680 Populus trichocarpa
Potri.003G057100 2.0kb upstream 2.0kb upstream 3716 true Chr03: 8496965-8500680 Populus trichocarpa
Potri.003G057100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8496965-8498964 Populus trichocarpa
Potri.003G057100 2.0kb downstream 2.0kb downstream 3716 true Chr03: 8498965-8502680 Populus trichocarpa
Potri.003G057100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8500681-8502680 Populus trichocarpa
Potri.003G057100 5.0kb upstream 5.0kb upstream 6716 true Chr03: 8493965-8500680 Populus trichocarpa
Potri.003G057100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8493965-8498964 Populus trichocarpa
Potri.003G057100 5.0kb downstream 5.0kb downstream 6716 true Chr03: 8498965-8505680 Populus trichocarpa
Potri.003G057100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8500681-8505680 Populus trichocarpa
Potri.003G057100 10.0kb upstream 10.0kb upstream 11716 true Chr03: 8488965-8500680 Populus trichocarpa
Potri.003G057100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8488965-8498964 Populus trichocarpa
Potri.003G057100 10.0kb downstream 10.0kb downstream 11716 true Chr03: 8498965-8510680 Populus trichocarpa
Potri.003G057100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8500681-8510680 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460365 5262 Malpighiales View MSA
124250776 5268 Malvidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain