Gene : Potri.003G171500 P. trichocarpa v3.1
Defline:  (1 of 4) K08908 - light-harvesting complex I chlorophyll a/b binding protein 2 (LHCA2) Genomic Order:  1787
Name:  ? Potri.003G171500 Secondary Identifier:  ? PAC:37236942
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G171500 0.5kb upstream 0.5kb upstream 2463 true Chr03: 18154375-18156837 Populus trichocarpa
Potri.003G171500 0.5kb upstream 0.5kb upstream 500 false Chr03: 18154375-18154874 Populus trichocarpa
Potri.003G171500 0.5kb downstream 0.5kb downstream 2463 true Chr03: 18154875-18157337 Populus trichocarpa
Potri.003G171500 0.5kb downstream 0.5kb downstream 500 false Chr03: 18156838-18157337 Populus trichocarpa
Potri.003G171500 1.0kb upstream 1.0kb upstream 2963 true Chr03: 18153875-18156837 Populus trichocarpa
Potri.003G171500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18153875-18154874 Populus trichocarpa
Potri.003G171500 1.0kb downstream 1.0kb downstream 2963 true Chr03: 18154875-18157837 Populus trichocarpa
Potri.003G171500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18156838-18157837 Populus trichocarpa
Potri.003G171500 2.0kb upstream 2.0kb upstream 3963 true Chr03: 18152875-18156837 Populus trichocarpa
Potri.003G171500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18152875-18154874 Populus trichocarpa
Potri.003G171500 2.0kb downstream 2.0kb downstream 3963 true Chr03: 18154875-18158837 Populus trichocarpa
Potri.003G171500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18156838-18158837 Populus trichocarpa
Potri.003G171500 5.0kb upstream 5.0kb upstream 6963 true Chr03: 18149875-18156837 Populus trichocarpa
Potri.003G171500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18149875-18154874 Populus trichocarpa
Potri.003G171500 5.0kb downstream 5.0kb downstream 6963 true Chr03: 18154875-18161837 Populus trichocarpa
Potri.003G171500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18156838-18161837 Populus trichocarpa
Potri.003G171500 10.0kb upstream 10.0kb upstream 11963 true Chr03: 18144875-18156837 Populus trichocarpa
Potri.003G171500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18144875-18154874 Populus trichocarpa
Potri.003G171500 10.0kb downstream 10.0kb downstream 11963 true Chr03: 18154875-18166837 Populus trichocarpa
Potri.003G171500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18156838-18166837 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448459 5262 Malpighiales View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain