Gene : Potri.003G158400 P. trichocarpa v3.1
Defline:  (1 of 3) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  1654
Name:  ? Potri.003G158400 Secondary Identifier:  ? PAC:37235371
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6303 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G158400 0.5kb upstream 0.5kb upstream 5508 true Chr03: 17061749-17067256 Populus trichocarpa
Potri.003G158400 0.5kb upstream 0.5kb upstream 500 false Chr03: 17061749-17062248 Populus trichocarpa
Potri.003G158400 0.5kb downstream 0.5kb downstream 5508 true Chr03: 17062249-17067756 Populus trichocarpa
Potri.003G158400 0.5kb downstream 0.5kb downstream 500 false Chr03: 17067257-17067756 Populus trichocarpa
Potri.003G158400 1.0kb upstream 1.0kb upstream 6008 true Chr03: 17061249-17067256 Populus trichocarpa
Potri.003G158400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17061249-17062248 Populus trichocarpa
Potri.003G158400 1.0kb downstream 1.0kb downstream 6008 true Chr03: 17062249-17068256 Populus trichocarpa
Potri.003G158400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17067257-17068256 Populus trichocarpa
Potri.003G158400 2.0kb upstream 2.0kb upstream 7008 true Chr03: 17060249-17067256 Populus trichocarpa
Potri.003G158400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17060249-17062248 Populus trichocarpa
Potri.003G158400 2.0kb downstream 2.0kb downstream 7008 true Chr03: 17062249-17069256 Populus trichocarpa
Potri.003G158400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17067257-17069256 Populus trichocarpa
Potri.003G158400 5.0kb upstream 5.0kb upstream 10008 true Chr03: 17057249-17067256 Populus trichocarpa
Potri.003G158400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17057249-17062248 Populus trichocarpa
Potri.003G158400 5.0kb downstream 5.0kb downstream 10008 true Chr03: 17062249-17072256 Populus trichocarpa
Potri.003G158400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17067257-17072256 Populus trichocarpa
Potri.003G158400 10.0kb upstream 10.0kb upstream 15008 true Chr03: 17052249-17067256 Populus trichocarpa
Potri.003G158400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17052249-17062248 Populus trichocarpa
Potri.003G158400 10.0kb downstream 10.0kb downstream 15008 true Chr03: 17062249-17077256 Populus trichocarpa
Potri.003G158400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17067257-17077256 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461998 5262 Malpighiales View MSA
124241053 5268 Malvidae View MSA
124063161 5270 Rosid View MSA
123738140 5271 Pentapetalae View MSA
122789213 5272 Eudicot View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain