Gene : Potri.003G139100 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  1457
Name:  ? Potri.003G139100 Secondary Identifier:  ? PAC:37236452
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G139100 0.5kb upstream 0.5kb upstream 5850 true Chr03: 15680539-15686388 Populus trichocarpa
Potri.003G139100 0.5kb upstream 0.5kb upstream 500 false Chr03: 15685889-15686388 Populus trichocarpa
Potri.003G139100 0.5kb downstream 0.5kb downstream 5850 true Chr03: 15680039-15685888 Populus trichocarpa
Potri.003G139100 0.5kb downstream 0.5kb downstream 500 false Chr03: 15680039-15680538 Populus trichocarpa
Potri.003G139100 1.0kb upstream 1.0kb upstream 6350 true Chr03: 15680539-15686888 Populus trichocarpa
Potri.003G139100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15685889-15686888 Populus trichocarpa
Potri.003G139100 1.0kb downstream 1.0kb downstream 6350 true Chr03: 15679539-15685888 Populus trichocarpa
Potri.003G139100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15679539-15680538 Populus trichocarpa
Potri.003G139100 2.0kb upstream 2.0kb upstream 7350 true Chr03: 15680539-15687888 Populus trichocarpa
Potri.003G139100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15685889-15687888 Populus trichocarpa
Potri.003G139100 2.0kb downstream 2.0kb downstream 7350 true Chr03: 15678539-15685888 Populus trichocarpa
Potri.003G139100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15678539-15680538 Populus trichocarpa
Potri.003G139100 5.0kb upstream 5.0kb upstream 10350 true Chr03: 15680539-15690888 Populus trichocarpa
Potri.003G139100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15685889-15690888 Populus trichocarpa
Potri.003G139100 5.0kb downstream 5.0kb downstream 10350 true Chr03: 15675539-15685888 Populus trichocarpa
Potri.003G139100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15675539-15680538 Populus trichocarpa
Potri.003G139100 10.0kb upstream 10.0kb upstream 15350 true Chr03: 15680539-15695888 Populus trichocarpa
Potri.003G139100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15685889-15695888 Populus trichocarpa
Potri.003G139100 10.0kb downstream 10.0kb downstream 15350 true Chr03: 15670539-15685888 Populus trichocarpa
Potri.003G139100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15670539-15680538 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462330 5262 Malpighiales View MSA
124240679 5268 Malvidae View MSA
124068790 5270 Rosid View MSA
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain