Gene : Potri.003G140600 P. trichocarpa v3.1

Defline:  (1 of 5) K00940 - nucleoside-diphosphate kinase (ndk, NME) Genomic Order:  1471
Name:  ? Potri.003G140600 Secondary Identifier:  ? PAC:37238013

Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-162 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6545 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7176 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7196 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7197 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7200 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7205 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7208 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7210 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7220 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7221 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7222 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7224 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7226 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7227 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7228 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G140600 0.5kb upstream 0.5kb upstream 4229 true Chr03: 15793030-15797258 Populus trichocarpa
Potri.003G140600 0.5kb upstream 0.5kb upstream 500 false Chr03: 15793030-15793529 Populus trichocarpa
Potri.003G140600 0.5kb downstream 0.5kb downstream 4229 true Chr03: 15793530-15797758 Populus trichocarpa
Potri.003G140600 0.5kb downstream 0.5kb downstream 500 false Chr03: 15797259-15797758 Populus trichocarpa
Potri.003G140600 1.0kb upstream 1.0kb upstream 4729 true Chr03: 15792530-15797258 Populus trichocarpa
Potri.003G140600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15792530-15793529 Populus trichocarpa
Potri.003G140600 1.0kb downstream 1.0kb downstream 4729 true Chr03: 15793530-15798258 Populus trichocarpa
Potri.003G140600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15797259-15798258 Populus trichocarpa
Potri.003G140600 2.0kb upstream 2.0kb upstream 5729 true Chr03: 15791530-15797258 Populus trichocarpa
Potri.003G140600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15791530-15793529 Populus trichocarpa
Potri.003G140600 2.0kb downstream 2.0kb downstream 5729 true Chr03: 15793530-15799258 Populus trichocarpa
Potri.003G140600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15797259-15799258 Populus trichocarpa
Potri.003G140600 5.0kb upstream 5.0kb upstream 8729 true Chr03: 15788530-15797258 Populus trichocarpa
Potri.003G140600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15788530-15793529 Populus trichocarpa
Potri.003G140600 5.0kb downstream 5.0kb downstream 8729 true Chr03: 15793530-15802258 Populus trichocarpa
Potri.003G140600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15797259-15802258 Populus trichocarpa
Potri.003G140600 10.0kb upstream 10.0kb upstream 13729 true Chr03: 15783530-15797258 Populus trichocarpa
Potri.003G140600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15783530-15793529 Populus trichocarpa
Potri.003G140600 10.0kb downstream 10.0kb downstream 13729 true Chr03: 15793530-15807258 Populus trichocarpa
Potri.003G140600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15797259-15807258 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458083 5262 Malpighiales View MSA
124238363 5268 Malvidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain