Gene : Potri.003G223100 P. trichocarpa v3.1

Defline:  (1 of 4) PTHR11817//PTHR11817:SF5 - PYRUVATE KINASE // PYRUVATE KINASE-RELATED Genomic Order:  2328
Name:  ? Potri.003G223100 Secondary Identifier:  ? PAC:37236957

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G223100 0.5kb upstream 0.5kb upstream 3844 true Chr03: 21718805-21722648 Populus trichocarpa
Potri.003G223100 0.5kb upstream 0.5kb upstream 500 false Chr03: 21718805-21719304 Populus trichocarpa
Potri.003G223100 0.5kb downstream 0.5kb downstream 3844 true Chr03: 21719305-21723148 Populus trichocarpa
Potri.003G223100 0.5kb downstream 0.5kb downstream 500 false Chr03: 21722649-21723148 Populus trichocarpa
Potri.003G223100 1.0kb upstream 1.0kb upstream 4344 true Chr03: 21718305-21722648 Populus trichocarpa
Potri.003G223100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21718305-21719304 Populus trichocarpa
Potri.003G223100 1.0kb downstream 1.0kb downstream 4344 true Chr03: 21719305-21723648 Populus trichocarpa
Potri.003G223100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21722649-21723648 Populus trichocarpa
Potri.003G223100 2.0kb upstream 2.0kb upstream 5344 true Chr03: 21717305-21722648 Populus trichocarpa
Potri.003G223100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21717305-21719304 Populus trichocarpa
Potri.003G223100 2.0kb downstream 2.0kb downstream 5344 true Chr03: 21719305-21724648 Populus trichocarpa
Potri.003G223100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21722649-21724648 Populus trichocarpa
Potri.003G223100 5.0kb upstream 5.0kb upstream 8344 true Chr03: 21714305-21722648 Populus trichocarpa
Potri.003G223100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21714305-21719304 Populus trichocarpa
Potri.003G223100 5.0kb downstream 5.0kb downstream 8344 true Chr03: 21719305-21727648 Populus trichocarpa
Potri.003G223100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21722649-21727648 Populus trichocarpa
Potri.003G223100 10.0kb upstream 10.0kb upstream 13344 true Chr03: 21709305-21722648 Populus trichocarpa
Potri.003G223100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21709305-21719304 Populus trichocarpa
Potri.003G223100 10.0kb downstream 10.0kb downstream 13344 true Chr03: 21719305-21732648 Populus trichocarpa
Potri.003G223100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21722649-21732648 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460957 5262 Malpighiales View MSA
124237186 5268 Malvidae View MSA
124068384 5270 Rosid View MSA
123737970 5271 Pentapetalae View MSA
122792873 5272 Eudicot View MSA
122044181 5273 Angiosperm View MSA
121310247 5274 Embryophyte View MSA
123427047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain