Gene : Potri.003G215001 P. trichocarpa v3.1

Defline:  (1 of 11) PTHR31388:SF22 - PEROXIDASE 22-RELATED Genomic Order:  2244
Name:  ? Potri.003G215001 Secondary Identifier:  ? PAC:37236118

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7214 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7445 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G215001 0.5kb upstream 0.5kb upstream 2144 true Chr03: 21228600-21230743 Populus trichocarpa
Potri.003G215001 0.5kb upstream 0.5kb upstream 500 false Chr03: 21230244-21230743 Populus trichocarpa
Potri.003G215001 0.5kb downstream 0.5kb downstream 2144 true Chr03: 21228100-21230243 Populus trichocarpa
Potri.003G215001 0.5kb downstream 0.5kb downstream 500 false Chr03: 21228100-21228599 Populus trichocarpa
Potri.003G215001 1.0kb upstream 1.0kb upstream 2644 true Chr03: 21228600-21231243 Populus trichocarpa
Potri.003G215001 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21230244-21231243 Populus trichocarpa
Potri.003G215001 1.0kb downstream 1.0kb downstream 2644 true Chr03: 21227600-21230243 Populus trichocarpa
Potri.003G215001 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21227600-21228599 Populus trichocarpa
Potri.003G215001 2.0kb upstream 2.0kb upstream 3644 true Chr03: 21228600-21232243 Populus trichocarpa
Potri.003G215001 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21230244-21232243 Populus trichocarpa
Potri.003G215001 2.0kb downstream 2.0kb downstream 3644 true Chr03: 21226600-21230243 Populus trichocarpa
Potri.003G215001 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21226600-21228599 Populus trichocarpa
Potri.003G215001 5.0kb upstream 5.0kb upstream 6644 true Chr03: 21228600-21235243 Populus trichocarpa
Potri.003G215001 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21230244-21235243 Populus trichocarpa
Potri.003G215001 5.0kb downstream 5.0kb downstream 6644 true Chr03: 21223600-21230243 Populus trichocarpa
Potri.003G215001 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21223600-21228599 Populus trichocarpa
Potri.003G215001 10.0kb upstream 10.0kb upstream 11644 true Chr03: 21228600-21240243 Populus trichocarpa
Potri.003G215001 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21230244-21240243 Populus trichocarpa
Potri.003G215001 10.0kb downstream 10.0kb downstream 11644 true Chr03: 21218600-21230243 Populus trichocarpa
Potri.003G215001 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21218600-21228599 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456541 5262 Malpighiales View MSA
124249587 5268 Malvidae View MSA
124074807 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain