Gene : Potri.004G057300 P. trichocarpa v3.1

Defline:  (1 of 17) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  573
Name:  ? Potri.004G057300 Secondary Identifier:  ? PAC:37229659

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G057300 0.5kb upstream 0.5kb upstream 1304 true Chr04: 4581827-4583130 Populus trichocarpa
Potri.004G057300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4581827-4582326 Populus trichocarpa
Potri.004G057300 0.5kb downstream 0.5kb downstream 1304 true Chr04: 4582327-4583630 Populus trichocarpa
Potri.004G057300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4583131-4583630 Populus trichocarpa
Potri.004G057300 1.0kb upstream 1.0kb upstream 1804 true Chr04: 4581327-4583130 Populus trichocarpa
Potri.004G057300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4581327-4582326 Populus trichocarpa
Potri.004G057300 1.0kb downstream 1.0kb downstream 1804 true Chr04: 4582327-4584130 Populus trichocarpa
Potri.004G057300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4583131-4584130 Populus trichocarpa
Potri.004G057300 2.0kb upstream 2.0kb upstream 2804 true Chr04: 4580327-4583130 Populus trichocarpa
Potri.004G057300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4580327-4582326 Populus trichocarpa
Potri.004G057300 2.0kb downstream 2.0kb downstream 2804 true Chr04: 4582327-4585130 Populus trichocarpa
Potri.004G057300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4583131-4585130 Populus trichocarpa
Potri.004G057300 5.0kb upstream 5.0kb upstream 5804 true Chr04: 4577327-4583130 Populus trichocarpa
Potri.004G057300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4577327-4582326 Populus trichocarpa
Potri.004G057300 5.0kb downstream 5.0kb downstream 5804 true Chr04: 4582327-4588130 Populus trichocarpa
Potri.004G057300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4583131-4588130 Populus trichocarpa
Potri.004G057300 10.0kb upstream 10.0kb upstream 10804 true Chr04: 4572327-4583130 Populus trichocarpa
Potri.004G057300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4572327-4582326 Populus trichocarpa
Potri.004G057300 10.0kb downstream 10.0kb downstream 10804 true Chr04: 4582327-4593130 Populus trichocarpa
Potri.004G057300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4583131-4593130 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122457557 5262 Malpighiales View MSA
124246470 5268 Malvidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain