Gene : Potri.004G062900 P. trichocarpa v3.1

Defline:  (1 of 6) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Genomic Order:  633
Name:  ? Potri.004G062900 Secondary Identifier:  ? PAC:37231506

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G062900 0.5kb upstream 0.5kb upstream 1820 true Chr04: 5175514-5177333 Populus trichocarpa
Potri.004G062900 0.5kb upstream 0.5kb upstream 500 false Chr04: 5176834-5177333 Populus trichocarpa
Potri.004G062900 0.5kb downstream 0.5kb downstream 1820 true Chr04: 5175014-5176833 Populus trichocarpa
Potri.004G062900 0.5kb downstream 0.5kb downstream 500 false Chr04: 5175014-5175513 Populus trichocarpa
Potri.004G062900 1.0kb upstream 1.0kb upstream 2320 true Chr04: 5175514-5177833 Populus trichocarpa
Potri.004G062900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5176834-5177833 Populus trichocarpa
Potri.004G062900 1.0kb downstream 1.0kb downstream 2320 true Chr04: 5174514-5176833 Populus trichocarpa
Potri.004G062900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5174514-5175513 Populus trichocarpa
Potri.004G062900 2.0kb upstream 2.0kb upstream 3320 true Chr04: 5175514-5178833 Populus trichocarpa
Potri.004G062900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5176834-5178833 Populus trichocarpa
Potri.004G062900 2.0kb downstream 2.0kb downstream 3320 true Chr04: 5173514-5176833 Populus trichocarpa
Potri.004G062900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5173514-5175513 Populus trichocarpa
Potri.004G062900 5.0kb upstream 5.0kb upstream 6320 true Chr04: 5175514-5181833 Populus trichocarpa
Potri.004G062900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5176834-5181833 Populus trichocarpa
Potri.004G062900 5.0kb downstream 5.0kb downstream 6320 true Chr04: 5170514-5176833 Populus trichocarpa
Potri.004G062900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5170514-5175513 Populus trichocarpa
Potri.004G062900 10.0kb upstream 10.0kb upstream 11320 true Chr04: 5175514-5186833 Populus trichocarpa
Potri.004G062900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5176834-5186833 Populus trichocarpa
Potri.004G062900 10.0kb downstream 10.0kb downstream 11320 true Chr04: 5165514-5176833 Populus trichocarpa
Potri.004G062900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5165514-5175513 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455917 5262 Malpighiales View MSA
124237872 5268 Malvidae View MSA
124050168 5270 Rosid View MSA
123737409 5271 Pentapetalae View MSA
122787896 5272 Eudicot View MSA
122044023 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121350808 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain