Gene : Potri.004G035200 P. trichocarpa v3.1

Defline:  (1 of 2) K14851 - ribosomal RNA-processing protein 17 (RRP17, NOL12) Genomic Order:  348
Name:  ? Potri.004G035200 Secondary Identifier:  ? PAC:37231042

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G035200 0.5kb upstream 0.5kb upstream 3399 true Chr04: 2617066-2620464 Populus trichocarpa
Potri.004G035200 0.5kb upstream 0.5kb upstream 500 false Chr04: 2619965-2620464 Populus trichocarpa
Potri.004G035200 0.5kb downstream 0.5kb downstream 3399 true Chr04: 2616566-2619964 Populus trichocarpa
Potri.004G035200 0.5kb downstream 0.5kb downstream 500 false Chr04: 2616566-2617065 Populus trichocarpa
Potri.004G035200 1.0kb upstream 1.0kb upstream 3899 true Chr04: 2617066-2620964 Populus trichocarpa
Potri.004G035200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2619965-2620964 Populus trichocarpa
Potri.004G035200 1.0kb downstream 1.0kb downstream 3899 true Chr04: 2616066-2619964 Populus trichocarpa
Potri.004G035200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2616066-2617065 Populus trichocarpa
Potri.004G035200 2.0kb upstream 2.0kb upstream 4899 true Chr04: 2617066-2621964 Populus trichocarpa
Potri.004G035200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2619965-2621964 Populus trichocarpa
Potri.004G035200 2.0kb downstream 2.0kb downstream 4899 true Chr04: 2615066-2619964 Populus trichocarpa
Potri.004G035200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2615066-2617065 Populus trichocarpa
Potri.004G035200 5.0kb upstream 5.0kb upstream 7899 true Chr04: 2617066-2624964 Populus trichocarpa
Potri.004G035200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2619965-2624964 Populus trichocarpa
Potri.004G035200 5.0kb downstream 5.0kb downstream 7899 true Chr04: 2612066-2619964 Populus trichocarpa
Potri.004G035200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2612066-2617065 Populus trichocarpa
Potri.004G035200 10.0kb upstream 10.0kb upstream 12899 true Chr04: 2617066-2629964 Populus trichocarpa
Potri.004G035200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2619965-2629964 Populus trichocarpa
Potri.004G035200 10.0kb downstream 10.0kb downstream 12899 true Chr04: 2607066-2619964 Populus trichocarpa
Potri.004G035200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2607066-2617065 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041503 5273 Angiosperm View MSA
122451101 5262 Malpighiales View MSA
124236943 5268 Malvidae View MSA
124064896 5270 Rosid View MSA
123739275 5271 Pentapetalae View MSA
122788503 5272 Eudicot View MSA
121347582 5274 Embryophyte View MSA
123426889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain