Gene : Potri.004G138400 P. trichocarpa v3.1

Defline:  (1 of 2) K01772 - ferrochelatase (hemH, FECH) Genomic Order:  1405
Name:  ? Potri.004G138400 Secondary Identifier:  ? PAC:37231453

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HEME-BIOSYNTHESIS-II Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G138400 0.5kb upstream 0.5kb upstream 7512 true Chr04: 16027187-16034698 Populus trichocarpa
Potri.004G138400 0.5kb upstream 0.5kb upstream 500 false Chr04: 16034199-16034698 Populus trichocarpa
Potri.004G138400 0.5kb downstream 0.5kb downstream 7512 true Chr04: 16026687-16034198 Populus trichocarpa
Potri.004G138400 0.5kb downstream 0.5kb downstream 500 false Chr04: 16026687-16027186 Populus trichocarpa
Potri.004G138400 1.0kb upstream 1.0kb upstream 8012 true Chr04: 16027187-16035198 Populus trichocarpa
Potri.004G138400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 16034199-16035198 Populus trichocarpa
Potri.004G138400 1.0kb downstream 1.0kb downstream 8012 true Chr04: 16026187-16034198 Populus trichocarpa
Potri.004G138400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 16026187-16027186 Populus trichocarpa
Potri.004G138400 2.0kb upstream 2.0kb upstream 9012 true Chr04: 16027187-16036198 Populus trichocarpa
Potri.004G138400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 16034199-16036198 Populus trichocarpa
Potri.004G138400 2.0kb downstream 2.0kb downstream 9012 true Chr04: 16025187-16034198 Populus trichocarpa
Potri.004G138400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 16025187-16027186 Populus trichocarpa
Potri.004G138400 5.0kb upstream 5.0kb upstream 12012 true Chr04: 16027187-16039198 Populus trichocarpa
Potri.004G138400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16034199-16039198 Populus trichocarpa
Potri.004G138400 5.0kb downstream 5.0kb downstream 12012 true Chr04: 16022187-16034198 Populus trichocarpa
Potri.004G138400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 16022187-16027186 Populus trichocarpa
Potri.004G138400 10.0kb upstream 10.0kb upstream 17012 true Chr04: 16027187-16044198 Populus trichocarpa
Potri.004G138400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 16034199-16044198 Populus trichocarpa
Potri.004G138400 10.0kb downstream 10.0kb downstream 17012 true Chr04: 16017187-16034198 Populus trichocarpa
Potri.004G138400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 16017187-16027186 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453785 5262 Malpighiales View MSA
124240498 5268 Malvidae View MSA
124065321 5270 Rosid View MSA
123739470 5271 Pentapetalae View MSA
122791512 5272 Eudicot View MSA
122044162 5273 Angiosperm View MSA
121346360 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain