Gene : Potri.004G174700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  1780
Name:  ? Potri.004G174700 Secondary Identifier:  ? PAC:37231660
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G174700 0.5kb upstream 0.5kb upstream 10354 true Chr04: 19310681-19321034 Populus trichocarpa
Potri.004G174700 0.5kb upstream 0.5kb upstream 500 false Chr04: 19310681-19311180 Populus trichocarpa
Potri.004G174700 0.5kb downstream 0.5kb downstream 10354 true Chr04: 19311181-19321534 Populus trichocarpa
Potri.004G174700 0.5kb downstream 0.5kb downstream 500 false Chr04: 19321035-19321534 Populus trichocarpa
Potri.004G174700 1.0kb upstream 1.0kb upstream 10854 true Chr04: 19310181-19321034 Populus trichocarpa
Potri.004G174700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19310181-19311180 Populus trichocarpa
Potri.004G174700 1.0kb downstream 1.0kb downstream 10854 true Chr04: 19311181-19322034 Populus trichocarpa
Potri.004G174700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19321035-19322034 Populus trichocarpa
Potri.004G174700 2.0kb upstream 2.0kb upstream 11854 true Chr04: 19309181-19321034 Populus trichocarpa
Potri.004G174700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19309181-19311180 Populus trichocarpa
Potri.004G174700 2.0kb downstream 2.0kb downstream 11854 true Chr04: 19311181-19323034 Populus trichocarpa
Potri.004G174700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19321035-19323034 Populus trichocarpa
Potri.004G174700 5.0kb upstream 5.0kb upstream 14854 true Chr04: 19306181-19321034 Populus trichocarpa
Potri.004G174700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19306181-19311180 Populus trichocarpa
Potri.004G174700 5.0kb downstream 5.0kb downstream 14854 true Chr04: 19311181-19326034 Populus trichocarpa
Potri.004G174700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19321035-19326034 Populus trichocarpa
Potri.004G174700 10.0kb upstream 10.0kb upstream 19854 true Chr04: 19301181-19321034 Populus trichocarpa
Potri.004G174700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19301181-19311180 Populus trichocarpa
Potri.004G174700 10.0kb downstream 10.0kb downstream 19854 true Chr04: 19311181-19331034 Populus trichocarpa
Potri.004G174700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19321035-19331034 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457943 5262 Malpighiales View MSA
124237502 5268 Malvidae View MSA
124064467 5270 Rosid View MSA
123740088 5271 Pentapetalae View MSA
122794553 5272 Eudicot View MSA
122042659 5273 Angiosperm View MSA
121345958 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain