Gene : Potri.005G051200 P. trichocarpa v3.1

Defline:  (1 of 3) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  544
Name:  ? Potri.005G051200 Secondary Identifier:  ? PAC:37265472

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G051200 0.5kb upstream 0.5kb upstream 2824 true Chr05: 3671119-3673942 Populus trichocarpa
Potri.005G051200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3673443-3673942 Populus trichocarpa
Potri.005G051200 0.5kb downstream 0.5kb downstream 2824 true Chr05: 3670619-3673442 Populus trichocarpa
Potri.005G051200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3670619-3671118 Populus trichocarpa
Potri.005G051200 1.0kb upstream 1.0kb upstream 3324 true Chr05: 3671119-3674442 Populus trichocarpa
Potri.005G051200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3673443-3674442 Populus trichocarpa
Potri.005G051200 1.0kb downstream 1.0kb downstream 3324 true Chr05: 3670119-3673442 Populus trichocarpa
Potri.005G051200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3670119-3671118 Populus trichocarpa
Potri.005G051200 2.0kb upstream 2.0kb upstream 4324 true Chr05: 3671119-3675442 Populus trichocarpa
Potri.005G051200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3673443-3675442 Populus trichocarpa
Potri.005G051200 2.0kb downstream 2.0kb downstream 4324 true Chr05: 3669119-3673442 Populus trichocarpa
Potri.005G051200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3669119-3671118 Populus trichocarpa
Potri.005G051200 5.0kb upstream 5.0kb upstream 7324 true Chr05: 3671119-3678442 Populus trichocarpa
Potri.005G051200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3673443-3678442 Populus trichocarpa
Potri.005G051200 5.0kb downstream 5.0kb downstream 7324 true Chr05: 3666119-3673442 Populus trichocarpa
Potri.005G051200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3666119-3671118 Populus trichocarpa
Potri.005G051200 10.0kb upstream 10.0kb upstream 12324 true Chr05: 3671119-3683442 Populus trichocarpa
Potri.005G051200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3673443-3683442 Populus trichocarpa
Potri.005G051200 10.0kb downstream 10.0kb downstream 12324 true Chr05: 3661119-3673442 Populus trichocarpa
Potri.005G051200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3661119-3671118 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425871 5262 Malpighiales View MSA
124244111 5268 Malvidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain