Gene : Potri.005G044800 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR20863//PTHR20863:SF29 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  473
Name:  ? Potri.005G044800 Secondary Identifier:  ? PAC:37266060

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G044800 0.5kb upstream 0.5kb upstream 2891 true Chr05: 3289322-3292212 Populus trichocarpa
Potri.005G044800 0.5kb upstream 0.5kb upstream 500 false Chr05: 3291713-3292212 Populus trichocarpa
Potri.005G044800 0.5kb downstream 0.5kb downstream 2891 true Chr05: 3288822-3291712 Populus trichocarpa
Potri.005G044800 0.5kb downstream 0.5kb downstream 500 false Chr05: 3288822-3289321 Populus trichocarpa
Potri.005G044800 1.0kb upstream 1.0kb upstream 3391 true Chr05: 3289322-3292712 Populus trichocarpa
Potri.005G044800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3291713-3292712 Populus trichocarpa
Potri.005G044800 1.0kb downstream 1.0kb downstream 3391 true Chr05: 3288322-3291712 Populus trichocarpa
Potri.005G044800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3288322-3289321 Populus trichocarpa
Potri.005G044800 2.0kb upstream 2.0kb upstream 4391 true Chr05: 3289322-3293712 Populus trichocarpa
Potri.005G044800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3291713-3293712 Populus trichocarpa
Potri.005G044800 2.0kb downstream 2.0kb downstream 4391 true Chr05: 3287322-3291712 Populus trichocarpa
Potri.005G044800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3287322-3289321 Populus trichocarpa
Potri.005G044800 5.0kb upstream 5.0kb upstream 7391 true Chr05: 3289322-3296712 Populus trichocarpa
Potri.005G044800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3291713-3296712 Populus trichocarpa
Potri.005G044800 5.0kb downstream 5.0kb downstream 7391 true Chr05: 3284322-3291712 Populus trichocarpa
Potri.005G044800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3284322-3289321 Populus trichocarpa
Potri.005G044800 10.0kb upstream 10.0kb upstream 12391 true Chr05: 3289322-3301712 Populus trichocarpa
Potri.005G044800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3291713-3301712 Populus trichocarpa
Potri.005G044800 10.0kb downstream 10.0kb downstream 12391 true Chr05: 3279322-3291712 Populus trichocarpa
Potri.005G044800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3279322-3289321 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459249 5262 Malpighiales View MSA
124251681 5268 Malvidae View MSA
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain