Gene : Potri.005G002400 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  25
Name:  ? Potri.005G002400 Secondary Identifier:  ? PAC:37264906

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G002400 0.5kb upstream 0.5kb upstream 1280 true Chr05: 134330-135609 Populus trichocarpa
Potri.005G002400 0.5kb upstream 0.5kb upstream 500 false Chr05: 134330-134829 Populus trichocarpa
Potri.005G002400 0.5kb downstream 0.5kb downstream 1280 true Chr05: 134830-136109 Populus trichocarpa
Potri.005G002400 0.5kb downstream 0.5kb downstream 500 false Chr05: 135610-136109 Populus trichocarpa
Potri.005G002400 1.0kb upstream 1.0kb upstream 1780 true Chr05: 133830-135609 Populus trichocarpa
Potri.005G002400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 133830-134829 Populus trichocarpa
Potri.005G002400 1.0kb downstream 1.0kb downstream 1780 true Chr05: 134830-136609 Populus trichocarpa
Potri.005G002400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 135610-136609 Populus trichocarpa
Potri.005G002400 2.0kb upstream 2.0kb upstream 2780 true Chr05: 132830-135609 Populus trichocarpa
Potri.005G002400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 132830-134829 Populus trichocarpa
Potri.005G002400 2.0kb downstream 2.0kb downstream 2780 true Chr05: 134830-137609 Populus trichocarpa
Potri.005G002400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 135610-137609 Populus trichocarpa
Potri.005G002400 5.0kb upstream 5.0kb upstream 5780 true Chr05: 129830-135609 Populus trichocarpa
Potri.005G002400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 129830-134829 Populus trichocarpa
Potri.005G002400 5.0kb downstream 5.0kb downstream 5780 true Chr05: 134830-140609 Populus trichocarpa
Potri.005G002400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 135610-140609 Populus trichocarpa
Potri.005G002400 10.0kb upstream 10.0kb upstream 10780 true Chr05: 124830-135609 Populus trichocarpa
Potri.005G002400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 124830-134829 Populus trichocarpa
Potri.005G002400 10.0kb downstream 10.0kb downstream 10780 true Chr05: 134830-145609 Populus trichocarpa
Potri.005G002400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 135610-145609 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461010 5262 Malpighiales View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain