Gene : Potri.005G001200 P. trichocarpa v3.1
Defline:  (1 of 3) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  12
Name:  ? Potri.005G001200 Secondary Identifier:  ? PAC:37263457
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G001200 0.5kb upstream 0.5kb upstream 5140 true Chr05: 62562-67701 Populus trichocarpa
Potri.005G001200 0.5kb upstream 0.5kb upstream 500 false Chr05: 62562-63061 Populus trichocarpa
Potri.005G001200 0.5kb downstream 0.5kb downstream 5140 true Chr05: 63062-68201 Populus trichocarpa
Potri.005G001200 0.5kb downstream 0.5kb downstream 500 false Chr05: 67702-68201 Populus trichocarpa
Potri.005G001200 1.0kb upstream 1.0kb upstream 5640 true Chr05: 62062-67701 Populus trichocarpa
Potri.005G001200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 62062-63061 Populus trichocarpa
Potri.005G001200 1.0kb downstream 1.0kb downstream 5640 true Chr05: 63062-68701 Populus trichocarpa
Potri.005G001200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 67702-68701 Populus trichocarpa
Potri.005G001200 2.0kb upstream 2.0kb upstream 6640 true Chr05: 61062-67701 Populus trichocarpa
Potri.005G001200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61062-63061 Populus trichocarpa
Potri.005G001200 2.0kb downstream 2.0kb downstream 6640 true Chr05: 63062-69701 Populus trichocarpa
Potri.005G001200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 67702-69701 Populus trichocarpa
Potri.005G001200 5.0kb upstream 5.0kb upstream 9640 true Chr05: 58062-67701 Populus trichocarpa
Potri.005G001200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 58062-63061 Populus trichocarpa
Potri.005G001200 5.0kb downstream 5.0kb downstream 9640 true Chr05: 63062-72701 Populus trichocarpa
Potri.005G001200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 67702-72701 Populus trichocarpa
Potri.005G001200 10.0kb upstream 10.0kb upstream 14640 true Chr05: 53062-67701 Populus trichocarpa
Potri.005G001200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53062-63061 Populus trichocarpa
Potri.005G001200 10.0kb downstream 10.0kb downstream 14640 true Chr05: 63062-77701 Populus trichocarpa
Potri.005G001200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 67702-77701 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459436 5262 Malpighiales View MSA
124249324 5268 Malvidae View MSA
124065023 5270 Rosid View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain