Gene : Potri.005G090500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  954
Name:  ? Potri.005G090500 Secondary Identifier:  ? PAC:37263072
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G090500 0.5kb upstream 0.5kb upstream 6271 true Chr05: 6738869-6745139 Populus trichocarpa
Potri.005G090500 0.5kb upstream 0.5kb upstream 500 false Chr05: 6744640-6745139 Populus trichocarpa
Potri.005G090500 0.5kb downstream 0.5kb downstream 6271 true Chr05: 6738369-6744639 Populus trichocarpa
Potri.005G090500 0.5kb downstream 0.5kb downstream 500 false Chr05: 6738369-6738868 Populus trichocarpa
Potri.005G090500 1.0kb upstream 1.0kb upstream 6771 true Chr05: 6738869-6745639 Populus trichocarpa
Potri.005G090500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6744640-6745639 Populus trichocarpa
Potri.005G090500 1.0kb downstream 1.0kb downstream 6771 true Chr05: 6737869-6744639 Populus trichocarpa
Potri.005G090500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6737869-6738868 Populus trichocarpa
Potri.005G090500 2.0kb upstream 2.0kb upstream 7771 true Chr05: 6738869-6746639 Populus trichocarpa
Potri.005G090500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6744640-6746639 Populus trichocarpa
Potri.005G090500 2.0kb downstream 2.0kb downstream 7771 true Chr05: 6736869-6744639 Populus trichocarpa
Potri.005G090500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6736869-6738868 Populus trichocarpa
Potri.005G090500 5.0kb upstream 5.0kb upstream 10771 true Chr05: 6738869-6749639 Populus trichocarpa
Potri.005G090500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6744640-6749639 Populus trichocarpa
Potri.005G090500 5.0kb downstream 5.0kb downstream 10771 true Chr05: 6733869-6744639 Populus trichocarpa
Potri.005G090500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6733869-6738868 Populus trichocarpa
Potri.005G090500 10.0kb upstream 10.0kb upstream 15771 true Chr05: 6738869-6754639 Populus trichocarpa
Potri.005G090500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6744640-6754639 Populus trichocarpa
Potri.005G090500 10.0kb downstream 10.0kb downstream 15771 true Chr05: 6728869-6744639 Populus trichocarpa
Potri.005G090500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6728869-6738868 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453250 5262 Malpighiales View MSA
124254333 5268 Malvidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain