Gene : Potri.005G160100 P. trichocarpa v3.1
Defline:  (1 of 13) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1672
Name:  ? Potri.005G160100 Secondary Identifier:  ? PAC:37265844
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G160100 0.5kb upstream 0.5kb upstream 2130 true Chr05: 16102216-16104345 Populus trichocarpa
Potri.005G160100 0.5kb upstream 0.5kb upstream 500 false Chr05: 16103846-16104345 Populus trichocarpa
Potri.005G160100 0.5kb downstream 0.5kb downstream 2130 true Chr05: 16101716-16103845 Populus trichocarpa
Potri.005G160100 0.5kb downstream 0.5kb downstream 500 false Chr05: 16101716-16102215 Populus trichocarpa
Potri.005G160100 1.0kb upstream 1.0kb upstream 2630 true Chr05: 16102216-16104845 Populus trichocarpa
Potri.005G160100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 16103846-16104845 Populus trichocarpa
Potri.005G160100 1.0kb downstream 1.0kb downstream 2630 true Chr05: 16101216-16103845 Populus trichocarpa
Potri.005G160100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 16101216-16102215 Populus trichocarpa
Potri.005G160100 2.0kb upstream 2.0kb upstream 3630 true Chr05: 16102216-16105845 Populus trichocarpa
Potri.005G160100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 16103846-16105845 Populus trichocarpa
Potri.005G160100 2.0kb downstream 2.0kb downstream 3630 true Chr05: 16100216-16103845 Populus trichocarpa
Potri.005G160100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 16100216-16102215 Populus trichocarpa
Potri.005G160100 5.0kb upstream 5.0kb upstream 6630 true Chr05: 16102216-16108845 Populus trichocarpa
Potri.005G160100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 16103846-16108845 Populus trichocarpa
Potri.005G160100 5.0kb downstream 5.0kb downstream 6630 true Chr05: 16097216-16103845 Populus trichocarpa
Potri.005G160100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 16097216-16102215 Populus trichocarpa
Potri.005G160100 10.0kb upstream 10.0kb upstream 11630 true Chr05: 16102216-16113845 Populus trichocarpa
Potri.005G160100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 16103846-16113845 Populus trichocarpa
Potri.005G160100 10.0kb downstream 10.0kb downstream 11630 true Chr05: 16092216-16103845 Populus trichocarpa
Potri.005G160100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 16092216-16102215 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457126 5262 Malpighiales View MSA
124239016 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain