Gene : Potri.005G127000 P. trichocarpa v3.1

Defline:  (1 of 9) PTHR10830 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT Genomic Order:  1341
Name:  ? Potri.005G127000 Secondary Identifier:  ? PAC:37266404

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G127000 0.5kb upstream 0.5kb upstream 5032 true Chr05: 10005082-10010113 Populus trichocarpa
Potri.005G127000 0.5kb upstream 0.5kb upstream 500 false Chr05: 10005082-10005581 Populus trichocarpa
Potri.005G127000 0.5kb downstream 0.5kb downstream 5032 true Chr05: 10005582-10010613 Populus trichocarpa
Potri.005G127000 0.5kb downstream 0.5kb downstream 500 false Chr05: 10010114-10010613 Populus trichocarpa
Potri.005G127000 1.0kb upstream 1.0kb upstream 5532 true Chr05: 10004582-10010113 Populus trichocarpa
Potri.005G127000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10004582-10005581 Populus trichocarpa
Potri.005G127000 1.0kb downstream 1.0kb downstream 5532 true Chr05: 10005582-10011113 Populus trichocarpa
Potri.005G127000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10010114-10011113 Populus trichocarpa
Potri.005G127000 2.0kb upstream 2.0kb upstream 6532 true Chr05: 10003582-10010113 Populus trichocarpa
Potri.005G127000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10003582-10005581 Populus trichocarpa
Potri.005G127000 2.0kb downstream 2.0kb downstream 6532 true Chr05: 10005582-10012113 Populus trichocarpa
Potri.005G127000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10010114-10012113 Populus trichocarpa
Potri.005G127000 5.0kb upstream 5.0kb upstream 9532 true Chr05: 10000582-10010113 Populus trichocarpa
Potri.005G127000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10000582-10005581 Populus trichocarpa
Potri.005G127000 5.0kb downstream 5.0kb downstream 9532 true Chr05: 10005582-10015113 Populus trichocarpa
Potri.005G127000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10010114-10015113 Populus trichocarpa
Potri.005G127000 10.0kb upstream 10.0kb upstream 14532 true Chr05: 9995582-10010113 Populus trichocarpa
Potri.005G127000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9995582-10005581 Populus trichocarpa
Potri.005G127000 10.0kb downstream 10.0kb downstream 14532 true Chr05: 10005582-10020113 Populus trichocarpa
Potri.005G127000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10010114-10020113 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457221 5262 Malpighiales View MSA
124247082 5268 Malvidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain