Gene : Potri.005G189800 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  1981
Name:  ? Potri.005G189800 Secondary Identifier:  ? PAC:37264181
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G189800 0.5kb upstream 0.5kb upstream 2027 true Chr05: 20718780-20720806 Populus trichocarpa
Potri.005G189800 0.5kb upstream 0.5kb upstream 500 false Chr05: 20720307-20720806 Populus trichocarpa
Potri.005G189800 0.5kb downstream 0.5kb downstream 2027 true Chr05: 20718280-20720306 Populus trichocarpa
Potri.005G189800 0.5kb downstream 0.5kb downstream 500 false Chr05: 20718280-20718779 Populus trichocarpa
Potri.005G189800 1.0kb upstream 1.0kb upstream 2527 true Chr05: 20718780-20721306 Populus trichocarpa
Potri.005G189800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 20720307-20721306 Populus trichocarpa
Potri.005G189800 1.0kb downstream 1.0kb downstream 2527 true Chr05: 20717780-20720306 Populus trichocarpa
Potri.005G189800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 20717780-20718779 Populus trichocarpa
Potri.005G189800 2.0kb upstream 2.0kb upstream 3527 true Chr05: 20718780-20722306 Populus trichocarpa
Potri.005G189800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 20720307-20722306 Populus trichocarpa
Potri.005G189800 2.0kb downstream 2.0kb downstream 3527 true Chr05: 20716780-20720306 Populus trichocarpa
Potri.005G189800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 20716780-20718779 Populus trichocarpa
Potri.005G189800 5.0kb upstream 5.0kb upstream 6527 true Chr05: 20718780-20725306 Populus trichocarpa
Potri.005G189800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 20720307-20725306 Populus trichocarpa
Potri.005G189800 5.0kb downstream 5.0kb downstream 6527 true Chr05: 20713780-20720306 Populus trichocarpa
Potri.005G189800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 20713780-20718779 Populus trichocarpa
Potri.005G189800 10.0kb upstream 10.0kb upstream 11527 true Chr05: 20718780-20730306 Populus trichocarpa
Potri.005G189800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 20720307-20730306 Populus trichocarpa
Potri.005G189800 10.0kb downstream 10.0kb downstream 11527 true Chr05: 20708780-20720306 Populus trichocarpa
Potri.005G189800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 20708780-20718779 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122412976 5262 Malpighiales View MSA
124246768 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain