Gene : Potri.005G258300 P. trichocarpa v3.1

Defline:  (1 of 3) K02178 - checkpoint serine/threonine-protein kinase (BUB1) Genomic Order:  2690
Name:  ? Potri.005G258300 Secondary Identifier:  ? PAC:37263061

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G258300 0.5kb upstream 0.5kb upstream 5694 true Chr05: 25744342-25750035 Populus trichocarpa
Potri.005G258300 0.5kb upstream 0.5kb upstream 500 false Chr05: 25749536-25750035 Populus trichocarpa
Potri.005G258300 0.5kb downstream 0.5kb downstream 5694 true Chr05: 25743842-25749535 Populus trichocarpa
Potri.005G258300 0.5kb downstream 0.5kb downstream 500 false Chr05: 25743842-25744341 Populus trichocarpa
Potri.005G258300 1.0kb upstream 1.0kb upstream 6194 true Chr05: 25744342-25750535 Populus trichocarpa
Potri.005G258300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25749536-25750535 Populus trichocarpa
Potri.005G258300 1.0kb downstream 1.0kb downstream 6194 true Chr05: 25743342-25749535 Populus trichocarpa
Potri.005G258300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25743342-25744341 Populus trichocarpa
Potri.005G258300 2.0kb upstream 2.0kb upstream 7194 true Chr05: 25744342-25751535 Populus trichocarpa
Potri.005G258300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25749536-25751535 Populus trichocarpa
Potri.005G258300 2.0kb downstream 2.0kb downstream 7194 true Chr05: 25742342-25749535 Populus trichocarpa
Potri.005G258300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25742342-25744341 Populus trichocarpa
Potri.005G258300 5.0kb upstream 5.0kb upstream 10194 true Chr05: 25744342-25754535 Populus trichocarpa
Potri.005G258300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25749536-25754535 Populus trichocarpa
Potri.005G258300 5.0kb downstream 5.0kb downstream 10194 true Chr05: 25739342-25749535 Populus trichocarpa
Potri.005G258300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25739342-25744341 Populus trichocarpa
Potri.005G258300 10.0kb upstream 10.0kb upstream 15194 true Chr05: 25744342-25759535 Populus trichocarpa
Potri.005G258300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25749536-25759535 Populus trichocarpa
Potri.005G258300 10.0kb downstream 10.0kb downstream 15194 true Chr05: 25734342-25749535 Populus trichocarpa
Potri.005G258300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25734342-25744341 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455702 5262 Malpighiales View MSA
124243473 5268 Malvidae View MSA
124066770 5270 Rosid View MSA
123740309 5271 Pentapetalae View MSA
122791320 5272 Eudicot View MSA
122046738 5273 Angiosperm View MSA
121310649 5274 Embryophyte View MSA
123348079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain