Gene : Potri.005G251600 P. trichocarpa v3.1

Defline:  (1 of 3) 1.11.1.21 - Catalase peroxidase Genomic Order:  2621
Name:  ? Potri.005G251600 Secondary Identifier:  ? PAC:37263204

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa DETOX1-PWY Populus trichocarpa pathologic  
Ptrichocarpa DETOX1-PWY-1 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G251600 0.5kb upstream 0.5kb upstream 3829 true Chr05: 25364902-25368730 Populus trichocarpa
Potri.005G251600 0.5kb upstream 0.5kb upstream 500 false Chr05: 25364902-25365401 Populus trichocarpa
Potri.005G251600 0.5kb downstream 0.5kb downstream 3829 true Chr05: 25365402-25369230 Populus trichocarpa
Potri.005G251600 0.5kb downstream 0.5kb downstream 500 false Chr05: 25368731-25369230 Populus trichocarpa
Potri.005G251600 1.0kb upstream 1.0kb upstream 4329 true Chr05: 25364402-25368730 Populus trichocarpa
Potri.005G251600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25364402-25365401 Populus trichocarpa
Potri.005G251600 1.0kb downstream 1.0kb downstream 4329 true Chr05: 25365402-25369730 Populus trichocarpa
Potri.005G251600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25368731-25369730 Populus trichocarpa
Potri.005G251600 2.0kb upstream 2.0kb upstream 5329 true Chr05: 25363402-25368730 Populus trichocarpa
Potri.005G251600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25363402-25365401 Populus trichocarpa
Potri.005G251600 2.0kb downstream 2.0kb downstream 5329 true Chr05: 25365402-25370730 Populus trichocarpa
Potri.005G251600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25368731-25370730 Populus trichocarpa
Potri.005G251600 5.0kb upstream 5.0kb upstream 8329 true Chr05: 25360402-25368730 Populus trichocarpa
Potri.005G251600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25360402-25365401 Populus trichocarpa
Potri.005G251600 5.0kb downstream 5.0kb downstream 8329 true Chr05: 25365402-25373730 Populus trichocarpa
Potri.005G251600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25368731-25373730 Populus trichocarpa
Potri.005G251600 10.0kb upstream 10.0kb upstream 13329 true Chr05: 25355402-25368730 Populus trichocarpa
Potri.005G251600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25355402-25365401 Populus trichocarpa
Potri.005G251600 10.0kb downstream 10.0kb downstream 13329 true Chr05: 25365402-25378730 Populus trichocarpa
Potri.005G251600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25368731-25378730 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122425968 5262 Malpighiales View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain