Gene : Potri.005G235400 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  2455
Name:  ? Potri.005G235400 Secondary Identifier:  ? PAC:37264551
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6441 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G235400 0.5kb upstream 0.5kb upstream 8603 true Chr05: 24288368-24296970 Populus trichocarpa
Potri.005G235400 0.5kb upstream 0.5kb upstream 500 false Chr05: 24296471-24296970 Populus trichocarpa
Potri.005G235400 0.5kb downstream 0.5kb downstream 8603 true Chr05: 24287868-24296470 Populus trichocarpa
Potri.005G235400 0.5kb downstream 0.5kb downstream 500 false Chr05: 24287868-24288367 Populus trichocarpa
Potri.005G235400 1.0kb upstream 1.0kb upstream 9103 true Chr05: 24288368-24297470 Populus trichocarpa
Potri.005G235400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24296471-24297470 Populus trichocarpa
Potri.005G235400 1.0kb downstream 1.0kb downstream 9103 true Chr05: 24287368-24296470 Populus trichocarpa
Potri.005G235400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24287368-24288367 Populus trichocarpa
Potri.005G235400 2.0kb upstream 2.0kb upstream 10103 true Chr05: 24288368-24298470 Populus trichocarpa
Potri.005G235400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24296471-24298470 Populus trichocarpa
Potri.005G235400 2.0kb downstream 2.0kb downstream 10103 true Chr05: 24286368-24296470 Populus trichocarpa
Potri.005G235400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24286368-24288367 Populus trichocarpa
Potri.005G235400 5.0kb upstream 5.0kb upstream 13103 true Chr05: 24288368-24301470 Populus trichocarpa
Potri.005G235400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24296471-24301470 Populus trichocarpa
Potri.005G235400 5.0kb downstream 5.0kb downstream 13103 true Chr05: 24283368-24296470 Populus trichocarpa
Potri.005G235400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24283368-24288367 Populus trichocarpa
Potri.005G235400 10.0kb upstream 10.0kb upstream 18103 true Chr05: 24288368-24306470 Populus trichocarpa
Potri.005G235400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24296471-24306470 Populus trichocarpa
Potri.005G235400 10.0kb downstream 10.0kb downstream 18103 true Chr05: 24278368-24296470 Populus trichocarpa
Potri.005G235400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 24278368-24288367 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122383834 5262 Malpighiales View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain